RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ARRDC3Q96B67 414 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 CHMP6Q96FZ7 201 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 ZNF317Q96PQ6 595 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 OLFM1Q99784 485 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 IL26Q9NPH9 171 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 TRPV5Q9NQA5 729 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 PRSS16Q9NQE7 514 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 APPL1Q9UKG1 709 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 SARDHQ9UL12 918 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 EMCNQ9ULC0 261 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 VPS9D1Q9Y2B5 631 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 ACOT9Q9Y305 439 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 VWA7Q9Y334 891 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 MTF2Q9Y483 593 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-221ENST00000641573 STON1Q9Y6Q2 735 aa13.03□□□□□ -0.32
PHGDH-221ENST00000641573 A0A087X1B8 175 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-221ENST00000641573 K7EQS6 105 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 GAPDHSO14556 408 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-221ENST00000641573 PLIN3O60664 434 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 LRP3O75074 770 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 PRAMEF1O95521 474 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 VIMP08670 466 aaKnown RBP13.02□□□□□ -0.33
PHGDH-221ENST00000641573 SLC35E2BP0CK96 405 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 COL6A2P12110 1019 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF30P17039 623 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 TAC1P20366 129 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 ITGALP20701 1170 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 CD72P21854 359 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 ITGB7P26010 798 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 CTHP32929 405 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 WASP42768 502 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 CDKN2DP55273 166 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF460Q14592 562 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 CHRNA6Q15825 494 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 LPAL2Q16609 132 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 PDK4Q16654 411 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 ERAP2Q6P179 960 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 TXNDC11Q6PKC3 985 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 RFLNAQ6ZTI6 216 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 SNX20Q7Z614 316 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 LRRC34Q8IZ02 419 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 GPR26Q8NDV2 337 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 EZH1Q92800 747 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-221ENST00000641573 NELL1Q92832 810 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 AARSD1Q9BTE6 412 aaKnown RBP13.02□□□□□ -0.33
PHGDH-221ENST00000641573 ASB8Q9H765 288 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 PKD2L2Q9NZM6 624 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 TMEM216Q9P0N5 145 aa13.02□□□□□ -0.33
PHGDH-221ENST00000641573 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
PHGDH-221ENST00000641573 CEP295Q9C0D2 2601 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 C1QTNF3-AMACRE9PGA6 284 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 NPC1O15118 1278 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 IL1BP01584 269 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 PROCP04070 461 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 RETP07949 1114 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 DRD4P21917 467 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 FDXRP22570 491 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 FMO4P31512 558 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 TIE1P35590 1138 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 PTGER3P43115 390 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 RPS9P46781 194 aaKnown RBP13.01□□□□□ -0.33
PHGDH-221ENST00000641573 PSMD8P48556 350 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 SPINT3P49223 89 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 METAP1P53582 386 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 SEC13P55735 322 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 IRX4P78413 519 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 RALGDSQ12967 914 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 ENPP2Q13822 863 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 DBN1Q16643 649 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 CCDC153Q494R4 210 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 LYPLAL1Q5VWZ2 237 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 ZDHHC20Q5W0Z9 365 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 CERS6Q6ZMG9 384 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 RGS9BPQ6ZS82 235 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 HSD11B1LQ7Z5J1 315 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 LCA5Q86VQ0 697 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 SERPINA9Q86WD7 417 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 RALGPS2Q86X27 583 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-221ENST00000641573 MMAAQ8IVH4 418 aaKnown RBP13.01□□□□□ -0.33
PHGDH-221ENST00000641573 CHPFQ8IZ52 775 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF513Q8N8E2 541 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-221ENST00000641573 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF398Q8TD17 642 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 BCAS4Q8TDM0 211 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 KCTD4Q8WVF5 259 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 DNASE1L2Q92874 299 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 PPP1R16AQ96I34 528 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 CCT8L2Q96SF2 557 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 FAM107BQ9H098 131 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
PHGDH-221ENST00000641573 C8orf33Q9H7E9 229 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-221ENST00000641573 PRMT8Q9NR22 394 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms