RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PLD2O14939 933 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 ZW10O43264 779 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 B4GAT1O43505 415 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 TNFSF15O95150 251 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 EPOP01588 193 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 ACP5P13686 325 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 BPIP17213 487 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 CCKBRP32239 447 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 PTPN7P35236 360 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 EIF3EP60228 445 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 KIF5AQ12840 1032 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 EIF3IQ13347 325 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 MPP3Q13368 585 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 SIRPB2Q5JXA9 342 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 ZNF648Q5T619 568 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 AADACL2Q6P093 401 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 PEX26Q7Z412 305 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 ZNF438Q7Z4V0 828 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 PHYKPLQ8IUZ5 450 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 CDKL3Q8IVW4 592 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 SPACA3Q8IXA5 215 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 FBXO39Q8N4B4 442 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 GLYATL1Q969I3 302 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 MRGPRX2Q96LB1 330 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 FAM118BQ9BPY3 351 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 FSD1LQ9BXM9 530 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 OR2AG1Q9H205 316 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 CARD9Q9H257 536 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 BPIFA1Q9NP55 256 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 ATXN10Q9UBB4 475 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 TRIM10Q9UDY6 481 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 AMFRQ9UKV5 643 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 KCNK6Q9Y257 313 aa16.59■□□□□ 0.25
CACNA1A-259ENST00000638114 SCN8AQ9UQD0 1980 aa16.58■□□□□ 0.25
CACNA1A-259ENST00000638114 CACNA1GO43497 2377 aa16.58■□□□□ 0.25
CACNA1A-259ENST00000638114 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 GOLGA6L6A8MZA4 724 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 PPM1DO15297 605 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 GRID2O43424 1007 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 NUAK1O60285 661 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 TJP3O95049 919 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 RBP3P10745 1247 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 PYGMP11217 842 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 ZNF8P17098 575 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 MLLT3P42568 568 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 NR1D2Q14995 579 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 SLC1A5Q15758 541 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 PHF19Q5T6S3 580 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 PDPK2PQ6A1A2 396 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 ITPRIPL1Q6GPH6 555 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 DARS2Q6PI48 645 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 TMPRSS9Q7Z410 1059 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 PIM3Q86V86 326 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 SYCE1Q8N0S2 351 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 BLOC1S5Q8TDH9 187 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 KCNE4Q8WWG9 221 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 GBA3Q9H227 469 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 TRABDQ9H4I3 376 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 RDH14Q9HBH5 336 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 TRIM39Q9HCM9 518 aa16.58■□□□□ 0.24
CACNA1A-259ENST00000638114 PTPRQQ9UMZ3 2332 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 A0A0U1RQJ8 604 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 CDRT15L2A8MXV6 281 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 KCNN4O15554 427 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 SNX2O60749 519 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 ANXA9O76027 345 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 STK10O94804 968 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 CPNE6O95741 557 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 EML2O95834 649 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 ITGA2BP08514 1039 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 JMJD7P0C870 316 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 HGFP14210 728 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 HLA-DPA1P20036 260 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A5P35504 534 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 GPR3P46089 330 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 GEMP55040 296 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 TLE3Q04726 772 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 ZFP36L1Q07352 338 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 CRTC3Q6UUV7 619 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 USP53Q70EK8 1073 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 GLT6D1Q7Z4J2 308 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 ADGRG6Q86SQ4 1221 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 SFRP1Q8N474 314 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 TTC30BQ8N4P2 665 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 UBL4BQ8N7F7 174 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 SLC37A2Q8TED4 501 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 PLEKHG4BQ96PX9 1271 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 NUDT22Q9BRQ3 303 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 FICDQ9BVA6 458 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 SEMA6CQ9H3T2 930 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 KCNK4Q9NYG8 393 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 HACD3Q9P035 362 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 TBC1D29Q9UFV1 150 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 PISDQ9UG56 409 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 PACSIN2Q9UNF0 486 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 LOXL2Q9Y4K0 774 aa16.57■□□□□ 0.24
CACNA1A-259ENST00000638114 MIF4GDA9UHW6 222 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 KLK10O43240 276 aa16.56■□□□□ 0.24
CACNA1A-259ENST00000638114 MTX2O75431 263 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms