RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 RNF220Q5VTB9 566 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 RBM44Q6ZP01 1051 aaKnown RBP14.12□□□□□ -0.15
GABRB3-219ENST00000636466 CDK20Q8IZL9 346 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 MAGEH1Q9H213 219 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 ATAD3AQ9NVI7 634 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 GABRQQ9UN88 632 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 SH3GLB1Q9Y371 365 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 TOPAZ1Q8N9V7 1692 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 EFCAB14O75071 495 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 ALOX12P18054 663 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 PAICSP22234 425 aaKnown RBP14.12□□□□□ -0.15
GABRB3-219ENST00000636466 CREB5Q02930 508 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 SFSWAPQ12872 951 aaKnown RBP14.12□□□□□ -0.15
GABRB3-219ENST00000636466 TRIM25Q14258 630 aaKnown RBP14.12□□□□□ -0.15
GABRB3-219ENST00000636466 TTC23Q5W5X9 447 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 CDCA2Q69YH5 1023 aaPredicted RBP14.12□□□□□ -0.15
GABRB3-219ENST00000636466 ZNF438Q7Z4V0 828 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 DPP10Q8N608 796 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 CLDN19Q8N6F1 224 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 CRYGNQ8WXF5 182 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 TCF12Q99081 682 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 PAAF1Q9BRP4 392 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 PCDHAC1Q9H158 963 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 FAM83DQ9H4H8 585 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 RASSF1Q9NS23 344 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 ATP6V1HQ9UI12 483 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 C3orf18Q9UK00 162 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 PAIP2BQ9ULR5 123 aaKnown RBP14.12□□□□□ -0.15
GABRB3-219ENST00000636466 PTPRZ1P23471 2315 aaPredicted RBP14.12□□□□□ -0.15
GABRB3-219ENST00000636466 KDM3BQ7LBC6 1761 aa14.12□□□□□ -0.15
GABRB3-219ENST00000636466 NDUFB5O43674 189 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 SGTAO43765 313 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 ALPIP09923 528 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 VAV1P15498 845 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 NR4A1P22736 598 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 PAX3P23760 479 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 PURAQ00577 322 aaKnown RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 MPPE1Q53F39 396 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CFAP206Q8IYR0 622 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CLP1Q92989 425 aaKnown RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 USP7Q93009 1102 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 HAPLN2Q9GZV7 340 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 LRTM1Q9HBL6 345 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 TSC22D4Q9Y3Q8 395 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 A0A0U1RQF3 1178 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 AMD1P17707 334 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 GMPRP36959 345 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 SOX4Q06945 474 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 ACSBG2Q5FVE4 666 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CHST9Q7L1S5 443 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 PIM3Q86V86 326 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 PQLC3Q8N755 202 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 PHF10Q8WUB8 498 aaKnown RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 MOCOSQ96EN8 888 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 SLC39A3Q9BRY0 314 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 EPS8L2Q9H6S3 715 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 SGK2Q9HBY8 427 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 AASDHPPTQ9NRN7 309 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 ABCB8Q9NUT2 735 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 DAPK2Q9UIK4 370 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CNTN6Q9UQ52 1028 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CAB39Q9Y376 341 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CICQ96RK0 1608 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 GSAPA4D1B5 854 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 DYRK3O43781 588 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CNTN5O94779 1100 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 TGDSO95455 350 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 ADSLP30566 484 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 NOVP48745 357 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 GATMP50440 423 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 ST13P50502 369 aaKnown RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CASP9P55211 416 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 LCP2Q13094 533 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 GPAT3Q53EU6 434 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 INO80DQ53TQ3 878 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 TMC5Q6UXY8 1006 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 KIAA0408Q6ZU52 694 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 ZNF540Q8NDQ6 660 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 BRSK1Q8TDC3 778 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 KLK6Q92876 244 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 EBPLQ9BY08 206 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CRTAC1Q9NQ79 661 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 PIPSLA2A3N6 862 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 FAM25AB3EWG3 89 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 FAM25CB3EWG5 89 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 FAM25GB3EWG6 89 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 SLC28A1O00337 649 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 SYN3O14994 580 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 KRT20P35900 424 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 CDH4P55283 916 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 MPP2Q14168 576 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 INAQ16352 499 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 KRT73Q86Y46 540 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 WDTC1Q8N5D0 677 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 KLHL32Q96NJ5 620 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 OR52B2Q96RD2 323 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 MCMBPQ9BTE3 642 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 REXO4Q9GZR2 422 aaKnown RBP14.11□□□□□ -0.15
GABRB3-219ENST00000636466 EQTNQ9NQ60 294 aa14.11□□□□□ -0.15
GABRB3-219ENST00000636466 PSME2Q9UL46 239 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms