RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 MAGEB16A2A368 324 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 E9PBE3 544 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 G3V2L1 256 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 KLHL41O60662 606 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 CLDN11O75508 207 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 BCAS2O75934 225 aaPredicted RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 OR6B1O95007 311 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 ME2P23368 584 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 MZF1P28698 734 aaPredicted RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 PPARGP37231 505 aaPredicted RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 KIR2DL1P43626 348 aaPredicted RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 RPS9P46781 194 aaKnown RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 CSE1LP55060 971 aaKnown RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 MTAPQ13126 283 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 SLC9B1Q4ZJI4 515 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 ACBD5Q5T8D3 534 aaPredicted RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 EGFLAMQ63HQ2 1017 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 SEL1L3Q68CR1 1132 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 CHST9Q7L1S5 443 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 CLEC14AQ86T13 490 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 ADIPOR2Q86V24 386 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 UNC5BQ8IZJ1 945 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 APCDD1Q8J025 514 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 DCLK2Q8N568 766 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 CNTD1Q8N815 330 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 CIPCQ9C0C6 399 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 DRC3Q9H069 523 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 EFCAB1Q9HAE3 211 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 GALNT8Q9NY28 637 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 UBAP1Q9NZ09 502 aa15.43■□□□□ 0.06
CLN8-209ENST00000635970 NYNRINQ9P2P1 1898 aaKnown RBP15.43■□□□□ 0.06
CLN8-209ENST00000635970 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 PRSS51A0A1B0GVH4 220 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 MAP3K6O95382 1288 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 GOT1P17174 413 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 HOXC13P31276 330 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 RPL14P50914 215 aaKnown RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 SESN2P58004 480 aaPredicted RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 ZNF177Q13360 481 aaPredicted RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 DPYSQ14117 519 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 PDK1Q15118 436 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 FBXO43Q4G163 708 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 KIAA0907Q7Z7F0 614 aaPredicted RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 CCDC117Q8IWD4 279 aaPredicted RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 ZNF513Q8N8E2 541 aaPredicted RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 ZFP28Q8NHY6 868 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 USP33Q8TEY7 942 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 ACOX2Q99424 681 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 SHCBP1LQ9BZQ2 653 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 NMRAL1Q9HBL8 299 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 OXSMQ9NWU1 459 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 PSAT1Q9Y617 370 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 RPS6KL1Q9Y6S9 549 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 AIM2O14862 343 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 OR1E1P30953 314 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 TNFRSF4P43489 277 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 TPI1P60174 286 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 HPCAP84074 193 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 PRKAA1Q13131 559 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 PPM1JQ5JR12 505 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 PITRM1Q5JRX3 1037 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 TMEM135Q86UB9 458 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 CYB5D2Q8WUJ1 264 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 PDCD6IPQ8WUM4 868 aaKnown RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 ERLEC1Q96DZ1 483 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 CDRT15Q96T59 188 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 IL22Q9GZX6 179 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 OCEL1Q9H607 264 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 NSMCE4AQ9NXX6 385 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 UTP6Q9NYH9 597 aaKnown RBP15.42■□□□□ 0.06
CLN8-209ENST00000635970 AK5Q9Y6K8 562 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 CACNA1IQ9P0X4 2223 aa15.42■□□□□ 0.06
CLN8-209ENST00000635970 A0A096LPK6 155 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 A0A0D9SEW6 157 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 ERI2A8K979 691 aaKnown RBP15.41■□□□□ 0.06
CLN8-209ENST00000635970 AP3B1O00203 1094 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 EEF2KO00418 725 aaKnown RBP15.41■□□□□ 0.06
CLN8-209ENST00000635970 RHOCP08134 193 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 WASP42768 502 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 PSMD8P48556 350 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 MYBPC1Q00872 1141 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 PLEKHG6Q3KR16 790 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 RNF219Q5W0B1 726 aaPredicted RBP15.41■□□□□ 0.06
CLN8-209ENST00000635970 SNX32Q86XE0 403 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 SYNPOQ8N3V7 929 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 IL17RCQ8NAC3 791 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLN8-209ENST00000635970 ZNF385DQ9H6B1 395 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 ELOVL2Q9NXB9 296 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 KIAA1522Q9P206 1035 aaPredicted RBP15.41■□□□□ 0.06
CLN8-209ENST00000635970 RAD54BQ9Y620 910 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 VPS13AQ96RL7 3174 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 NUP205Q92621 2012 aa15.41■□□□□ 0.06
CLN8-209ENST00000635970 CCDC160A6NGH7 325 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 RNF103O00237 685 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 KLF8O95600 359 aaPredicted RBP15.4■□□□□ 0.06
CLN8-209ENST00000635970 PYGLP06737 847 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 RHOQP17081 205 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 SERPINB5P36952 375 aa15.4■□□□□ 0.06
CLN8-209ENST00000635970 CTSOP43234 321 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms