RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ANXA8P13928 327 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NCF1P14598 390 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 CASTP20810 708 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 CPT2P23786 658 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PTPN3P26045 913 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 TTKP33981 857 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 CCT6AP40227 531 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PTGER3P43115 390 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ARHGDIBP52566 201 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 GTF2A1P52655 376 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 METAP1P53582 386 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 RWDD2BP57060 319 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SUMO2P61956 95 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 RPP38P78345 283 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PRAMEP78395 509 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ABATP80404 500 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 DR1Q01658 176 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SCN1BQ07699 218 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 IL24Q13007 206 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 DDX39BQ13838 428 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PTK6Q13882 451 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 CBFBQ13951 182 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 IRF3Q14653 427 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PCLAFQ15004 111 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 AANATQ16613 207 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NTRK2Q16620 822 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 FAM187BQ17R55 369 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 TWISTNBQ3B726 338 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ANKRD20A4Q4UJ75 823 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 LRRC23Q53EV4 343 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ANKRD20A8PQ5CZ79 823 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 RNASE12Q5GAN4 147 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 MDH1BQ5I0G3 518 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 RAB41Q5JT25 222 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PLAC9Q5JTB6 97 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 AARS2Q5JTZ9 985 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ANKRD20A2Q5SQ80 823 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ANKRD20A1Q5TYW2 823 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ANXA8L1Q5VT79 327 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ANKRD20A3Q5VUR7 823 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ETFRF1Q6IPR1 90 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 HEPHL1Q6MZM0 1159 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 MIS18BP1Q6P0N0 1132 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NEK5Q6P3R8 708 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ACSM6Q6P461 480 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 TMEM270Q6UE05 265 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 C16orf89Q6UX73 402 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 TRIM72Q6ZMU5 477 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 LRRC8DQ7L1W4 858 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ARMCX2Q7L311 632 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 TAS2R42Q7RTR8 314 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SLC22A9Q8IVM8 553 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SFTPA1Q8IWL2 248 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PHC2Q8IXK0 858 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ADGRF2Q8IZF7 708 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 TTC5Q8N0Z6 440 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SIX6OS1Q8N1H7 587 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SFRP1Q8N474 314 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SIRT6Q8N6T7 355 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PNPLA1Q8N8W4 532 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SYT2Q8N9I0 419 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NFKBIDQ8NI38 313 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 URGCPQ8TCY9 931 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ACTRT2Q8TDY3 377 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SCARB1Q8WTV0 552 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 WDR60Q8WVS4 1066 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 XAGE5Q8WWM1 108 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NPIPB3Q92617 1050 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 CORO2AQ92828 525 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 LRRC39Q96DD0 335 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 MASTLQ96GX5 879 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PRR11Q96HE9 360 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 GCNAQ96QF7 691 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PSKH2Q96QS6 385 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ABHD1Q96SE0 405 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NAA11Q9BSU3 229 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 MECRQ9BV79 373 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NTMT1Q9BV86 223 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 EDEM2Q9BV94 578 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 C1QTNF7Q9BXJ2 289 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 PINK1Q9BXM7 581 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 KLHL4Q9C0H6 718 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 CCSER1Q9C0I3 900 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SLC5A7Q9GZV3 580 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 THAP2Q9H0W7 228 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 RIBC2Q9H4K1 309 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 MVB12BQ9H7P6 319 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 COQ10BQ9H8M1 238 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SAP30LQ9HAJ7 183 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 LTB4R2Q9NPC1 389 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 MBNL1Q9NR56 388 aaKnown RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 ABCB8Q9NUT2 735 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 GIMAP4Q9NUV9 329 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 OR6C2Q9NZP2 312 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 TUBE1Q9UJT0 475 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 LEF1Q9UJU2 399 aaPredicted RBP2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SLC8A2Q9UPR5 921 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 NFS1Q9Y697 457 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 SBNO1A3KN83 1393 aa2.98□□□□□ -1.93
PSPC1-208ENST00000635562 CCDC187A0A096LP49 1063 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms