RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 IFI44Q8TCB0 444 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 MAPK15Q8TD08 544 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 PIH1D2Q8WWB5 315 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 TSACCQ96A04 125 aaPredicted RBP12.6□□□□□ -0.39
PNKP-217ENST00000625216 FUBP1Q96AE4 644 aaKnown RBP12.6□□□□□ -0.39
PNKP-217ENST00000625216 DEPDC7Q96QD5 511 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 WDR26Q9H7D7 661 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 EIF2B3Q9NR50 452 aaKnown RBP12.6□□□□□ -0.39
PNKP-217ENST00000625216 RAI2Q9Y5P3 530 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 AK5Q9Y6K8 562 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 PLXNB3Q9ULL4 1909 aa12.6□□□□□ -0.39
PNKP-217ENST00000625216 CPED1A4D0V7 1026 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 A8MX80 341 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 SMAPO00193 183 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 FZD6O60353 706 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 PPFIA2O75334 1257 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 BANF1O75531 89 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 SASH3O75995 380 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 APRTP07741 180 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 GM2AP17900 193 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 TEAD1P28347 426 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 RPL26P61254 145 aaKnown RBP12.59□□□□□ -0.39
PNKP-217ENST00000625216 DHX9Q08211 1270 aaKnown RBP12.59□□□□□ -0.39
PNKP-217ENST00000625216 NIPAL4Q0D2K0 466 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 OLIG2Q13516 323 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 CASP8Q14790 479 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 CDKN3Q16667 212 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 FNBP1LQ5T0N5 605 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 EFL1Q7Z2Z2 1120 aaKnown RBP12.59□□□□□ -0.39
PNKP-217ENST00000625216 NLRP8Q86W28 1048 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 RAVER1Q8IY67 606 aaKnown RBP12.59□□□□□ -0.39
PNKP-217ENST00000625216 OR6C4Q8NGE1 309 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 NUS1Q96E22 293 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 OXNAD1Q96HP4 312 aaPredicted RBP12.59□□□□□ -0.39
PNKP-217ENST00000625216 FCRL5Q96RD9 977 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 RBM15Q96T37 977 aaKnown RBP eCLIP12.59□□□□□ -0.39
PNKP-217ENST00000625216 WDR83Q9BRX9 315 aaKnown RBP12.59□□□□□ -0.39
PNKP-217ENST00000625216 FUT8Q9BYC5 575 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 FOXP3Q9BZS1 431 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 EPB41L4BQ9H329 900 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 PADI4Q9UM07 663 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 RPL26L1Q9UNX3 145 aaKnown RBP12.59□□□□□ -0.39
PNKP-217ENST00000625216 RAXQ9Y2V3 346 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 TTLL3Q9Y4R7 772 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 PTPRBP23467 1997 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 ZFHX4Q86UP3 3567 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 PKD1L2Q7Z442 2459 aa12.59□□□□□ -0.39
PNKP-217ENST00000625216 TP53BP1Q12888 1972 aaPredicted RBP12.58□□□□□ -0.4
PNKP-217ENST00000625216 TMEM202A6NGA9 273 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 E7ESA3 106 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 TCEA3O75764 348 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 APC2O95996 2303 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 MYF5P13349 255 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 ZNF30P17039 623 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 GRIA1P42261 906 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 EPHB1P54762 984 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 DSC2Q02487 901 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 DPTQ07507 201 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 ACACAQ13085 2346 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 SPARCL1Q14515 664 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 IHHQ14623 411 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 FASTKD3Q14CZ7 662 aaKnown RBP12.58□□□□□ -0.4
PNKP-217ENST00000625216 MSS51Q4VC12 460 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 KCTD11Q693B1 232 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 RD3Q7Z3Z2 195 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
PNKP-217ENST00000625216 SLC35F3Q8IY50 421 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 LSMEM2Q8N112 164 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 AGGF1Q8N302 714 aaeCLIP12.58□□□□□ -0.4
PNKP-217ENST00000625216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.58□□□□□ -0.4
PNKP-217ENST00000625216 ARL10Q8N8L6 244 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 MCUQ8NE86 351 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 OR1E3Q8WZA6 343 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 DTD2Q96FN9 168 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 SERPINB12Q96P63 405 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 TEX101Q9BY14 249 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 PHACTR1Q9C0D0 580 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 CDC42EP4Q9H3Q1 356 aaKnown RBP12.58□□□□□ -0.4
PNKP-217ENST00000625216 SAYSD1Q9NPB0 183 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 PHPT1Q9NRX4 125 aaPredicted RBP12.58□□□□□ -0.4
PNKP-217ENST00000625216 GPSM3Q9Y4H4 160 aa12.58□□□□□ -0.4
PNKP-217ENST00000625216 A0A087WV48 116 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 A0A0J9YYE9 177 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 NPIPB15A6NHN6 443 aaPredicted RBP12.57□□□□□ -0.4
PNKP-217ENST00000625216 E7EVH7 732 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 AP2A1O95782 977 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 MT-CYBP00156 380 aaPredicted RBP12.57□□□□□ -0.4
PNKP-217ENST00000625216 TRBC1P01850 177 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 PYGLP06737 847 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 MMP2P08253 660 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 PDHA1P08559 390 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 MYCLP1P12525 358 aaPredicted RBP12.57□□□□□ -0.4
PNKP-217ENST00000625216 LHCGRP22888 699 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 HSD17B3P37058 310 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 ETV3P41162 512 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 MAGEA3P43357 314 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 PMS2P54278 862 aa12.57□□□□□ -0.4
PNKP-217ENST00000625216 ARL4CP56559 192 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms