RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 RPS3P23396 243 aaKnown RBP eCLIP13.13□□□□□ -0.31
C3orf56-201ENST00000624688 EPHA3P29320 983 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 UGT1A3P35503 534 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 UGT1A5P35504 534 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 SPAM1P38567 509 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 ATP6V0D1P61421 351 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 PTSQ03393 145 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 KDSRQ06136 332 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 TSNQ15631 228 aaKnown RBP13.13□□□□□ -0.31
C3orf56-201ENST00000624688 CHRNA6Q15825 494 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 EML3Q32P44 896 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 LSM12Q3MHD2 195 aaKnown RBP13.13□□□□□ -0.31
C3orf56-201ENST00000624688 LRRC66Q68CR7 880 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 GRAMD4Q6IC98 578 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 CUZD1Q86UP6 607 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 C12orf40Q86WS4 652 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 PHTF2Q8N3S3 785 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 NKAPQ8N5F7 415 aaKnown RBP13.13□□□□□ -0.31
C3orf56-201ENST00000624688 TEX9Q8N6V9 391 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 PTGR2Q8N8N7 351 aaPredicted RBP13.13□□□□□ -0.31
C3orf56-201ENST00000624688 FAM13CQ8NE31 585 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 STAG3L4Q8TBR4 150 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 EEF1AKMT1Q8WVE0 214 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 OSCP1Q8WVF1 389 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.13□□□□□ -0.31
C3orf56-201ENST00000624688 BOCQ9BWV1 1114 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 GTSE1Q9NYZ3 720 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 TRMT6Q9UJA5 497 aaKnown RBP13.13□□□□□ -0.31
C3orf56-201ENST00000624688 APPL1Q9UKG1 709 aa13.13□□□□□ -0.31
C3orf56-201ENST00000624688 NPEPPSL1A6NEC2 478 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 LRRC14BA6NHZ5 514 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 AGAP14A8MT82 685 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 B2RBV5 119 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 PRMT5O14744 637 aaPredicted RBP13.12□□□□□ -0.31
C3orf56-201ENST00000624688 ECI2O75521 394 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 SIX3O95343 332 aaPredicted RBP13.12□□□□□ -0.31
C3orf56-201ENST00000624688 CHRM3P20309 590 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 ITGALP20701 1170 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 ACRV1P26436 265 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 PDCD2Q16342 344 aaPredicted RBP13.12□□□□□ -0.31
C3orf56-201ENST00000624688 FAM78AQ5JUQ0 283 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 FAM219BQ5XKK7 198 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 GDPD4Q6W3E5 623 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 RFLNAQ6ZTI6 216 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 USP45Q70EL2 814 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 CPNE9Q8IYJ1 553 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 KIAA1958Q8N8K9 716 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 RBM15BQ8NDT2 890 aaKnown RBP13.12□□□□□ -0.31
C3orf56-201ENST00000624688 NAT14Q8WUY8 206 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 FUBP1Q96AE4 644 aaKnown RBP13.12□□□□□ -0.31
C3orf56-201ENST00000624688 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
C3orf56-201ENST00000624688 TRMOQ9BU70 441 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 CCDC28BQ9BUN5 200 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 ZNF385DQ9H6B1 395 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 BRD9Q9H8M2 597 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 EML4Q9HC35 981 aaKnown RBP13.12□□□□□ -0.31
C3orf56-201ENST00000624688 DHRS7Q9Y394 339 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 PCDHB1Q9Y5F3 818 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 PRSS21Q9Y6M0 314 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 PLXNB3Q9ULL4 1909 aa13.12□□□□□ -0.31
C3orf56-201ENST00000624688 CCDC189A1A4V9 331 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 SDHDO14521 159 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
C3orf56-201ENST00000624688 DCXO43602 365 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 KLK8O60259 260 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 SUPT7LO94864 414 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 C1SP09871 688 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 ADH5P11766 374 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 TSPAN8P19075 237 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 MAGEA10P43363 369 aaPredicted RBP13.11□□□□□ -0.31
C3orf56-201ENST00000624688 PTPN5P54829 565 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 IL2P60568 153 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 BTKQ06187 659 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 NAA25Q14CX7 972 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 SNCBQ16143 134 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 PFKFB4Q16877 469 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 LRRC73Q5JTD7 316 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 TMPRSS6Q8IU80 811 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 NPAS3Q8IXF0 933 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 RBFAQ8N0V3 343 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 LKAAEAR1Q8TD35 194 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 LINGO1Q96FE5 620 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 KLHL32Q96NJ5 620 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 PLA2G4CQ9UP65 541 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 CDYLQ9Y232 598 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 WASF2Q9Y6W5 498 aa13.11□□□□□ -0.31
C3orf56-201ENST00000624688 EPOPA6NHQ4 379 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 TRPC5OSA6NMA1 111 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 SUPT3HB4E1H0 165 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 E5RI56 91 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 BTN3A1O00481 513 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 SUPT3HO75486 399 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 ARSAP15289 507 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 CD1EP15812 388 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 ZNF7P17097 686 aaPredicted RBP13.1□□□□□ -0.31
C3orf56-201ENST00000624688 DGKGP49619 791 aa13.1□□□□□ -0.31
C3orf56-201ENST00000624688 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms