RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 DNAJC6O75061 913 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 MTX2O75431 263 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 AP2A1O95782 977 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 C1QTNF9P0C862 333 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 ACP5P13686 325 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZNF8P17098 575 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 TPH1P17752 444 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 INSM1Q01101 510 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 PTPRCAPQ14761 206 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 CHRNA6Q15825 494 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 ATP13A5Q4VNC0 1218 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 C14orf28Q4W4Y0 310 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 PERM1Q5SV97 790 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 KCTD11Q693B1 232 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 CRTC3Q6UUV7 619 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCNI2Q6ZMN8 369 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 ADGRG6Q86SQ4 1221 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 PRUNE1Q86TP1 453 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 NRROSQ86YC3 692 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 OR6C4Q8NGE1 309 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCDC74AQ96AQ1 378 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 VPS35Q96QK1 796 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 NAP1L3Q99457 506 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCDC3Q9BQI4 270 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 RAB6BQ9NRW1 208 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 SPATS2LQ9NUQ6 558 aaKnown RBP13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 FKBPLQ9UIM3 349 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 APPL1Q9UKG1 709 aa13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 DRG1Q9Y295 367 aaKnown RBP13.83□□□□□ -0.2
PCDHGC3-208ENST00000622836 PTPRBP23467 1997 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 KNTC1P50748 2209 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 FAM221BA6H8Z2 402 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 ERI2A8K979 691 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 GPR89AB7ZAQ6 455 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 VEGFDO43915 354 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 NUAK1O60285 661 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A9O60656 530 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 CDK14O94921 469 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 PRAMEF1O95521 474 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 MT-CO3P00414 261 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 APRTP07741 180 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZSCAN5DPP0CG00 497 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 GPR89BP0CG08 455 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 GLB1P16278 677 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A6P19224 532 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A1P22309 533 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A4P22310 534 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A3P35503 534 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A5P35504 534 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 KCNJ1P48048 391 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 BASP1P80723 227 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 TARDBPQ13148 414 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 POU6F1Q14863 301 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 PLA2G4EQ3MJ16 856 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 LDLRAP1Q5SW96 308 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 DENND5AQ6IQ26 1287 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 DRICH1Q6PGQ1 229 aaPredicted RBP13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 KLHDC8BQ8IXV7 354 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 GPR156Q8NFN8 814 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 OR13C4Q8NGS5 318 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 MS4A14Q96JA4 679 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZCCHC2Q9C0B9 1178 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 OSGEPL1Q9H4B0 414 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A7Q9HAW7 530 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A10Q9HAW8 530 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 UGT1A8Q9HAW9 530 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 ARNT2Q9HBZ2 717 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 KCNK6Q9Y257 313 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 KCTD3Q9Y597 815 aa13.82□□□□□ -0.2
PCDHGC3-208ENST00000622836 USP27XA6NNY8 438 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 RHPN2P1A8MT19 583 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 PGRMC1O00264 195 aaKnown RBP13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 GPR39O43194 453 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 NOBOXO60393 691 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 SNX2O60749 519 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 ECEL1O95672 775 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 AKT1P31749 480 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 RPL22P35268 128 aaKnown RBP13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 HADHAP40939 763 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 PPM1FP49593 454 aaPredicted RBP13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 MAZP56270 477 aaKnown RBP13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 CDH17Q12864 832 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 SPIDRQ14159 915 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 INSCQ1MX18 579 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 OGFOD3Q6PK18 319 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 C4orf22Q6V702 233 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 LRRTM4Q86VH4 590 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 TRAPPC5Q8IUR0 188 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 SFTPA2Q8IWL1 248 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 RASGEF1CQ8N431 466 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 Q8N9G6 341 aaPredicted RBP13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 GLIS1Q8NBF1 620 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 OR52K1Q8NGK4 314 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZNF398Q8TD17 642 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 DTX3LQ8TDB6 740 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 GATA6Q92908 595 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 MAGOHBQ96A72 148 aaKnown RBP13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 DEPDC7Q96QD5 511 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms