RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 SLC22A17Q8WUG5 538 aa12.98□□□□□ -0.33
CHD1L-210ENST00000622533 RNF34Q969K3 372 aa12.98□□□□□ -0.33
CHD1L-210ENST00000622533 CELF6Q96J87 481 aaKnown RBP12.98□□□□□ -0.33
CHD1L-210ENST00000622533 HOPXQ9BPY8 73 aaPredicted RBP12.98□□□□□ -0.33
CHD1L-210ENST00000622533 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
CHD1L-210ENST00000622533 USP22Q9UPT9 525 aa12.98□□□□□ -0.33
CHD1L-210ENST00000622533 A8MT66 165 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 DFFAO00273 331 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 MATN3O15232 486 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 UGT2B4P06133 528 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 MYL3P08590 195 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 C7P10643 843 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 PTPN2P17706 415 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 RFC2P35250 354 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 ADRA1AP35348 466 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 ATP6V0D1P61421 351 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 CSHL1Q14406 222 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 FAM209AQ5JX71 171 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 UGT3A1Q6NUS8 523 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 LRRC49Q8IUZ0 686 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 SPATA22Q8NHS9 363 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 NDNFQ8TB73 568 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 PNPT1Q8TCS8 783 aaKnown RBP12.97□□□□□ -0.33
CHD1L-210ENST00000622533 PHF21BQ96EK2 531 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 ASB2Q96Q27 587 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 SMOQ99835 787 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 HOXD1Q9GZZ0 328 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 CATSPERBQ9H7T0 1116 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 MARCH7Q9H992 704 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 PTGDR2Q9Y5Y4 395 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 NOTOA8MTQ0 251 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 HTR1AP08908 422 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 ALDOCP09972 364 aaKnown RBP12.97□□□□□ -0.33
CHD1L-210ENST00000622533 CES1P23141 567 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 TUBA3CQ13748 450 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 SLC14A2Q15849 920 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 FUT11Q495W5 492 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 BTBD8Q5XKL5 378 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 AKAP14Q86UN6 197 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 LGI2Q8N0V4 545 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 MFSD4AQ8N468 514 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 C3orf30Q96M34 536 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 PARVBQ9HBI1 364 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 CRTAC1Q9NQ79 661 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 BAG5Q9UL15 447 aa12.97□□□□□ -0.33
CHD1L-210ENST00000622533 A0A0J9YYE9 177 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 TNPO2O14787 897 aaKnown RBP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 NADKO95544 446 aaPredicted RBP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 NAT1P18440 290 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 IMPDH1P20839 514 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 SERPINB1P30740 379 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 BNIP2Q12982 314 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 CTF1Q16619 201 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 GEN1Q17RS7 908 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 DPY19L1Q2PZI1 675 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 SCML4Q8N228 414 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 DNAJB14Q8TBM8 379 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 SMARCD1Q96GM5 515 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 YTHDF1Q9BYJ9 559 aaKnown RBP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 CCDC90BQ9GZT6 254 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 KATNBL1Q9H079 304 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 MIR1-1HGQ9H1L0 117 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 TRIT1Q9H3H1 467 aaKnown RBP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 CDH9Q9ULB4 789 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 NDUFAF1Q9Y375 327 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 MBLAC1A4D2B0 266 aaPredicted RBP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 PTGES3LE9PB15 166 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 MT-CYBP00156 380 aaPredicted RBP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 CAPN3P20807 821 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 CRHBPP24387 322 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 MEP1AQ16819 746 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 RABL3Q5HYI8 236 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 UBXN11Q5T124 520 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 PPP2R2DQ66LE6 453 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 LCN8Q6JVE9 175 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 BEND5Q7L4P6 421 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 PSMA8Q8TAA3 256 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 L3HYPDHQ96EM0 354 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 ZNF486Q96H40 463 aaPredicted RBP12.96□□□□□ -0.33
CHD1L-210ENST00000622533 SLC30A3Q99726 388 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 RNF38Q9H0F5 515 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 RMND5AQ9H871 391 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 ACTR3BQ9P1U1 418 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 SLCO3A1Q9UIG8 710 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 IPPQ9Y573 584 aa12.96□□□□□ -0.33
CHD1L-210ENST00000622533 POLR2AP24928 1970 aaKnown RBP12.96□□□□□ -0.34
CHD1L-210ENST00000622533 SHROOM3Q8TF72 1996 aa12.96□□□□□ -0.34
CHD1L-210ENST00000622533 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.95□□□□□ -0.34
CHD1L-210ENST00000622533 UGT2B11O75310 529 aa12.95□□□□□ -0.34
CHD1L-210ENST00000622533 LDLRP01130 860 aa12.95□□□□□ -0.34
CHD1L-210ENST00000622533 TCF3P15923 654 aa12.95□□□□□ -0.34
CHD1L-210ENST00000622533 ECT2LQ008S8 904 aa12.95□□□□□ -0.34
CHD1L-210ENST00000622533 SNX17Q15036 470 aa12.95□□□□□ -0.34
CHD1L-210ENST00000622533 LRIT3Q3SXY7 679 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms