RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CHRAC1Q9NRG0 131 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SMOXQ9NWM0 555 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 SYBUQ9NX95 663 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 VPS18Q9P253 973 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 TCAF1Q9Y4C2 921 aa14.19□□□□□ -0.14
CBWD3-217ENST00000621474 HEATR9A2RTY3 570 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 H3BM21 787 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 AQP9O43315 295 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 SLC25A14O95258 325 aaPredicted RBP14.18□□□□□ -0.14
CBWD3-217ENST00000621474 RASGRP1O95267 797 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 IVLP07476 585 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 PRSS56P0CW18 603 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 MGAT1P26572 445 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 ADCY8P40145 1251 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 HADHAP40939 763 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 TCEA2Q15560 299 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 TSTD2Q5T7W7 516 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 ADGRG6Q86SQ4 1221 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 CCL4L1Q8NHW4 92 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 TRIM56Q9BRZ2 755 aaKnown RBP14.18□□□□□ -0.14
CBWD3-217ENST00000621474 RTKNQ9BST9 563 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 SLC13A1Q9BZW2 595 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 IL22Q9GZX6 179 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 TMEM168Q9H0V1 697 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 CARS2Q9HA77 564 aaKnown RBP14.18□□□□□ -0.14
CBWD3-217ENST00000621474 TREX1Q9NSU2 369 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 ATXN10Q9UBB4 475 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 RIMKLBQ9ULI2 386 aa14.18□□□□□ -0.14
CBWD3-217ENST00000621474 ASXL3Q9C0F0 2248 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 TRBV5-4A0A0C4DH59 114 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 DCDC2BA2VCK2 349 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 OR51F1A6NGY5 319 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 TRIM38O00635 465 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 MLNP12872 115 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 ZNF8P17098 575 aaPredicted RBP14.17□□□□□ -0.14
CBWD3-217ENST00000621474 MC4RP32245 332 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 GRK6P43250 576 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 CDKN1CP49918 316 aaPredicted RBP14.17□□□□□ -0.14
CBWD3-217ENST00000621474 BLKP51451 505 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 PYCR3Q53H96 274 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 PCID2Q5JVF3 399 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 IZUMO3Q5VZ72 239 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 PHYKPLQ8IUZ5 450 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 DDHD1Q8NEL9 900 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 DEFB124Q8NES8 71 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 KIF18AQ8NI77 898 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 ZNF398Q8TD17 642 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 LMX1AQ8TE12 382 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 TRIM39Q9HCM9 518 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 APPL1Q9UKG1 709 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 ASPMQ8IZT6 3477 aa14.17□□□□□ -0.14
CBWD3-217ENST00000621474 GIPC1O14908 333 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 CHUKO15111 745 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 NUAK1O60285 661 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 SEC31AO94979 1220 aaKnown RBP14.16□□□□□ -0.14
CBWD3-217ENST00000621474 TNFP01375 233 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 CSRP1P21291 193 aaKnown RBP14.16□□□□□ -0.14
CBWD3-217ENST00000621474 ARNTP27540 789 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 RPL21P46778 160 aaKnown RBP14.16□□□□□ -0.14
CBWD3-217ENST00000621474 GNPDA1P46926 289 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 NPY2RP49146 381 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 CKAP4Q07065 602 aaKnown RBP14.16□□□□□ -0.14
CBWD3-217ENST00000621474 SUZ12Q15022 739 aaKnown RBP14.16□□□□□ -0.14
CBWD3-217ENST00000621474 GPRC6AQ5T6X5 926 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 PSAPL1Q6NUJ1 521 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 HIBCHQ6NVY1 386 aaPredicted RBP14.16□□□□□ -0.14
CBWD3-217ENST00000621474 MARK2Q7KZI7 788 aaKnown RBP14.16□□□□□ -0.14
CBWD3-217ENST00000621474 SNX20Q7Z614 316 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 NRROSQ86YC3 692 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 ZNF547Q8IVP9 402 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 PIANPQ8IYJ0 282 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 PNPLA1Q8N8W4 532 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 OR4C6Q8NH72 309 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 PEX13Q92968 403 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 MFSD3Q96ES6 412 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 KIFC1Q9BW19 673 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 OR2AG1Q9H205 316 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 FAM96AQ9H5X1 160 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 ASB8Q9H765 288 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 BFARQ9NZS9 450 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 SPASTQ9UBP0 616 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 MOSPD1Q9UJG1 213 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 PRKAB1Q9Y478 270 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 PLEKHM1Q9Y4G2 1056 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 CSNK1G3Q9Y6M4 447 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 RP1P56715 2156 aa14.16□□□□□ -0.14
CBWD3-217ENST00000621474 LY6G6EA0A0G2JKS1 128 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 CCDC162PA2VCL2 907 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 LMO7DNF2Z398 122 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 AP3B1O00203 1094 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 FFAR2O15552 330 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 ASMTLO95671 621 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SDHBP21912 280 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 NMBRP28336 390 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 FOXN2P32314 431 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 B4GALNT1Q00973 533 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 SKIDA1Q1XH10 827 aa14.15□□□□□ -0.14
CBWD3-217ENST00000621474 DEFB133Q30KQ1 61 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms