RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 KCNK4Q9NYG8 393 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 B4GALT6Q9UBX8 382 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 BOLA1Q9Y3E2 137 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 KRT87PA6NCN2 255 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 UBFD1O14562 309 aaKnown RBP7.74□□□□□ -1.17
NEK3-207ENST00000617054 POP4O95707 220 aaKnown RBP7.74□□□□□ -1.17
NEK3-207ENST00000617054 FGF19O95750 216 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 CISD3P0C7P0 127 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 SOX9P48436 509 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 AGTR2P50052 363 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 CREB5Q02930 508 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 SLC20A2Q08357 652 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 NFATC2Q13469 925 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 KCNC3Q14003 757 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 GRIN2CQ14957 1233 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 ATP13A5Q4VNC0 1218 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 SH2D4BQ5SQS7 431 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 KLC3Q6P597 504 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 SYCE2Q6PIF2 218 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 SCG3Q8WXD2 468 aaKnown RBP7.74□□□□□ -1.17
NEK3-207ENST00000617054 FUBP1Q96AE4 644 aaKnown RBP7.74□□□□□ -1.17
NEK3-207ENST00000617054 SLC7A6OSQ96CW6 309 aaPredicted RBP7.74□□□□□ -1.17
NEK3-207ENST00000617054 SCRN2Q96FV2 425 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 TSPAN17Q96FV3 270 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 ACOX2Q99424 681 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 FBRSL1Q9HCM7 1045 aaKnown RBP7.74□□□□□ -1.17
NEK3-207ENST00000617054 TAS2R13Q9NYV9 303 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 PTGDR2Q9Y5Y4 395 aa7.74□□□□□ -1.17
NEK3-207ENST00000617054 WDR87Q6ZQQ6 2873 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 GLYATL1P3A0A0U1RQE8 302 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 ATP6AP2A0A1C7CYW4 349 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 BTN3A1O00481 513 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 ATP6AP2O75787 350 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 IPO13O94829 963 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 WISP3O95389 354 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 COL6A2P12110 1019 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PKMP14618 531 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 OGNP20774 298 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 ETV3P41162 512 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 RECQLP46063 649 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 HYAL1Q12794 435 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 TUBB3Q13509 450 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 LAMB3Q13751 1172 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 ACAP2Q15057 778 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 NXNQ6DKJ4 435 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 GDPD4Q6W3E5 623 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 RINLQ6ZS11 566 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 Q6ZVL8 140 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 AHI1Q8N157 1196 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PHTF2Q8N3S3 785 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 ZNF398Q8TD17 642 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 FGF14Q92915 247 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 SMARCD2Q92925 531 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 UTP4Q969X6 686 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 SAMD11Q96NU1 681 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PLCD4Q9BRC7 762 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 DRC3Q9H069 523 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 ILKAPQ9H0C8 392 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 CDH19Q9H159 772 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 MSRAQ9UJ68 235 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PLA2G4CQ9UP65 541 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 COQ6Q9Y2Z9 468 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 ASB1Q9Y576 335 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 WASF2Q9Y6W5 498 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 ATXN2Q99700 1313 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 CCDC189A1A4V9 331 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 CAPN8A6NHC0 703 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 MEI4A8MW99 385 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 KPNA3O00505 521 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 DCXO43602 365 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 MTHFD2P13995 350 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 TTPAP49638 278 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 CACNG1Q06432 222 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 SLC14A2Q15849 920 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 SPDYAQ5MJ70 313 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PARM1Q6UWI2 310 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 VITQ6UXI7 678 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PIWIL4Q7Z3Z4 852 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 PACS2Q86VP3 889 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PTGR2Q8N8N7 351 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 RAB3IL1Q8TBN0 382 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 PEX13Q92968 403 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 CHFRQ96EP1 664 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 LINGO1Q96FE5 620 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 KCNA7Q96RP8 456 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 WRAP53Q9BUR4 548 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 ACTR5Q9H9F9 607 aaPredicted RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 HPS4Q9NQG7 708 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 INTS10Q9NVR2 710 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 CRLS1Q9UJA2 301 aa7.73□□□□□ -1.17
NEK3-207ENST00000617054 APOBEC2Q9Y235 224 aaKnown RBP7.73□□□□□ -1.17
NEK3-207ENST00000617054 WDFY4Q6ZS81 3184 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 DOCK8Q8NF50 2099 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 TBC1D3BA6NDS4 549 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 SUPT3HB4E1H0 165 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 GRID2O43424 1007 aa7.72□□□□□ -1.17
NEK3-207ENST00000617054 SUPT3HO75486 399 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms