RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	TADA1	Q96BN2	335 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	L3HYPDH	Q96EM0	354 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RPL10L	Q96L21	214 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	HBEGF	Q99075	208 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CENPK	Q9BS16	269 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TTPAL	Q9BTX7	342 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TUBB1	Q9H4B7	451 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	NOL11	Q9H8H0	719 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TAS2R13	Q9NYV9	303 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	INSIG1	O15503	277 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TIPRL	O75663	272 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GSTT1	P30711	240 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CORO1A	P31146	461 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	DIO3	P55073	304 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RFTN1	Q14699	578 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CYTH1	Q15438	398 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RBBP7	Q16576	425 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TCTN1	Q2MV58	587 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	HERC6	Q8IVU3	1022 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CDK15	Q96Q40	435 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ACOX2	Q99424	681 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CIB1	Q99828	191 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	C1orf50	Q9BV19	199 aa		13.81	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	COCH	O43405	550 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ECI2	O75521	394 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MTRF1	O75570	445 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	WISP3	O95389	354 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GALT	P07902	379 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CCDC159	P0C7I6	412 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	BMP1	P13497	986 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ITGB6	P18564	788 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MC4R	P32245	332 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	XIAP	P98170	497 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ZNF177	Q13360	481 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CNPY1	Q3B7I2	92 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	FUT11	Q495W5	492 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MTX3	Q5HYI7	312 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	VPS33A	Q96AX1	596 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ATOH8	Q96SQ7	321 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PRPF18	Q99633	342 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	COQ10B	Q9H8M1	238 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	AGO1	Q9UL18	857 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RAI2	Q9Y5P3	530 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SQOR	Q9Y6N5	450 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PRSS51	A0A1B0GVH4	220 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	C2orf81	A6NN90	581 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390		A8MX80	341 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CTPS1	P17812	591 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CLK1	P49759	484 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	NKX3-2	P78367	333 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RING1	Q06587	406 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RAD51	Q06609	339 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	DMPK	Q09013	629 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	KIAA1841	Q6NSI8	718 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	UGT3A1	Q6NUS8	523 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	NANOGNB	Q7Z5D8	188 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	STAG3L4	Q8TBR4	150 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TRAPPC9	Q96Q05	1148 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TRMO	Q9BU70	441 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	RNF38	Q9H0F5	515 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	LZTS1	Q9Y250	596 aa		13.8	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CASP8AP2	Q9UKL3	1982 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	C2orf78	A6NCI8	922 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ANGPT2	O15123	496 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	AKAP10	O43572	662 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	BAIAP3	O94812	1187 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CKMT2	P17540	419 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	GPX3	P22352	226 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CCL23	P55773	120 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PLIN5	Q00G26	463 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SETMAR	Q53H47	684 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	DEFB128	Q7Z7B8	93 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CARNMT1	Q8N4J0	409 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	DNAJB14	Q8TBM8	379 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	EEF1AKMT1	Q8WVE0	214 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	DLG3	Q92796	817 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	NMD3	Q96D46	503 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	BTBD9	Q96Q07	612 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	TRIB3	Q96RU7	358 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MAGEH1	Q9H213	219 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390		Q9H521	79 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	NLE1	Q9NVX2	485 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	FAM149A	A5PLN7	773 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390		E5RI56	91 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PRL	P01236	227 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SELP	P16109	830 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	UGT1A6	P19224	532 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	CAPN3	P20807	821 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	ACVR1	Q04771	509 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PLD1	Q13393	1074 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	SPPL2C	Q8IUH8	684 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	MIER2	Q8N344	545 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	FATE1	Q969F0	183 aa		13.79	□□□□□ -0.2
CACNA1C-231	ENST00000616390	PSKH2	Q96QS6	385 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms