RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 GLRA4Q5JXX5 417 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 CHST15Q7LFX5 561 aaPredicted RBP9.24□□□□□ -0.93
COL12A1-211ENST00000615798 SLC47A1Q96FL8 570 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 SPON1Q9HCB6 807 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 AURKAO14965 403 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 UCHL1P09936 223 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 PBX1P40424 430 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 ERVK-8P63133 956 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 PRKCDQ05655 676 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 PARP6Q2NL67 630 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 ARHGAP11AQ6P4F7 1023 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 IDO2Q6ZQW0 420 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 SLC35F3Q8IY50 421 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 TBC1D13Q9NVG8 400 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 SDHAF2Q9NX18 166 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 PLK2Q9NYY3 685 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 PCYOX1Q9UHG3 505 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 EFCAB9A8MZ26 197 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 H0Y858 1186 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 PRMT5O14744 637 aaPredicted RBP9.24□□□□□ -0.93
COL12A1-211ENST00000615798 DDX3YO15523 660 aaKnown RBP9.24□□□□□ -0.93
COL12A1-211ENST00000615798 CTNNB1P35222 781 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 DALRD3Q5D0E6 543 aaKnown RBP9.24□□□□□ -0.93
COL12A1-211ENST00000615798 CARD16Q5EG05 197 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 IER5Q5VY09 327 aa9.24□□□□□ -0.93
COL12A1-211ENST00000615798 RIC1Q4ADV7 1423 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 MPZL2O60487 215 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 CYP17A1P05093 508 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 OR6B3Q8NGW1 331 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF669Q96BR6 464 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 TMEM68Q96MH6 324 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 TREX2Q9BQ50 279 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 LACRTQ9GZZ8 138 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 PPIEQ9UNP9 301 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 LATS1O95835 1130 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 AMPD1P23109 780 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 CHMP24386 653 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 NPY2RP49146 381 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 STXBP1P61764 594 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 LIPEQ05469 1076 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 HYIQ5T013 277 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ELMOD1Q8N336 334 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ALPK1Q96QP1 1244 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ZYG11BQ9C0D3 744 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 RNF32Q9H0A6 362 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 STN1Q9H668 368 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 PCDH9Q9HC56 1237 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 CAPN10Q9HC96 672 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 XRN1Q8IZH2 1706 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 FCER2P06734 321 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 UMPSP11172 480 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SCN4BQ8IWT1 228 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 UBQLNLQ8IYU4 475 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ADCY4Q8NFM4 1077 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ASB2Q96Q27 587 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 AIREO43918 545 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 UGT2B4P06133 528 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 MMP10P09238 476 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 LINGO2Q7L985 606 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SLC30A5Q8TAD4 765 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SNTG2Q9NY99 539 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 RPLP0P05388 317 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 MTHFD1P11586 935 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 CERS1P27544 350 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 NCOA4Q13772 614 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 RNASEH2BQ5TBB1 312 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 AGMOQ6ZNB7 445 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 AGAP3Q96P47 875 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 TEFMQ96QE5 360 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SAMD10Q9BYL1 202 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SLC38A7Q9NVC3 462 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 TJP2Q9UDY2 1190 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 MED1Q15648 1581 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 FAM86C2PA6NEL3 165 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 E7ESA3 106 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SPAM1P38567 509 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 CXorf57Q6NSI4 855 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 COG5Q9UP83 839 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ANGPT4Q9Y264 503 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 DRG1Q9Y295 367 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 NCANO14594 1321 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 CHRNB1P11230 501 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 PKNOX1P55347 436 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 KCNJ2P63252 427 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ASTE1Q2TB18 679 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 KYAT3Q6YP21 454 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 KLF6Q99612 283 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 KAT8Q9H7Z6 458 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF214Q9UL59 606 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 SAMHD1Q9Y3Z3 626 aaKnown RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 CCDC163A0A0D9SF12 145 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 YY2O15391 372 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 HOXB8P17481 243 aaPredicted RBP9.23□□□□□ -0.93
COL12A1-211ENST00000615798 FNTBP49356 437 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 PGAP1Q75T13 922 aa9.23□□□□□ -0.93
COL12A1-211ENST00000615798 PDZD9Q8IXQ8 264 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms