RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 C12orf76Q8N812 135 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 PROX1Q92786 737 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 P2RY13Q9BPV8 354 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 RAB11FIP5Q9BXF6 653 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 MCOLN1Q9GZU1 580 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 FBXL12Q9NXK8 326 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 IL1RAPL1Q9NZN1 696 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 PRKAG3Q9UGI9 489 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 N4BP2Q86UW6 1770 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 SRRM3A6NNA2 597 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TGM5O43548 720 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 GJB5O95377 273 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 KRT75O95678 551 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 HNRNPLP14866 589 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 ME2P23368 584 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TCEAL1Q15170 157 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 ATP13A5Q4VNC0 1218 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 C1orf220Q5T0J3 134 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 CUZD1Q86UP6 607 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 CPNE8Q86YQ8 564 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 NELL1Q92832 810 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 NXNL1Q96CM4 212 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 KXD1Q9BQD3 176 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 HAPLN2Q9GZV7 340 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 PLLPQ9Y342 182 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TRBV23OR9-2A0A075B6M9 112 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 AGRPO00253 132 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 ADH1BP00325 375 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 GSTM1P09488 218 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 PFKLP17858 780 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 CHRNA4P43681 627 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 CLK3P49761 638 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 RAD23AP54725 363 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 PRKG2Q13237 762 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 MAPKAPK3Q16644 382 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 INAVAQ3KP66 663 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 ANXA8L1Q5VT79 327 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 POU5F2Q8N7G0 328 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 KBTBD7Q8WVZ9 684 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 KLK6Q92876 244 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 SLCO2A1Q92959 643 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC38A3Q99624 504 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 BTBD10Q9BSF8 475 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 AARSD1Q9BTE6 412 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 OR2AG1Q9H205 316 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC40A1Q9NP59 571 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 PCDH12Q9NPG4 1184 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 ZDHHC3Q9NYG2 299 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TMEM59LQ9UK28 342 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TRAF6Q9Y4K3 522 aa9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 TNRC6CQ9HCJ0 1690 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-208ENST00000615606 NUDT14O95848 222 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SNRPB2P08579 225 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TCF4P15884 667 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CDH3P22223 829 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 VHLP40337 213 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC16A1P53985 500 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 PRKAG1P54619 331 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CDH13P55290 713 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC1A5Q15758 541 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 PLEKHG6Q3KR16 790 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TBCELQ5QJ74 424 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SULT1C3Q6IMI6 304 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 FOXR1Q6PIV2 292 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 C11orf74Q86VG3 221 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 MMADHCQ9H3L0 296 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ZDHHC7Q9NXF8 308 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ARL5AQ9Y689 179 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF780BQ9Y6R6 833 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 MAN2B1O00754 1011 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CNTN5O94779 1100 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CNPP09543 421 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 IDO1P14902 403 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 RCN1Q15293 331 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 LRRC73Q5JTD7 316 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TPRG1Q6ZUI0 275 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 GPR180Q86V85 440 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TRIM69Q86WT6 500 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TCEAL8Q8IYN2 117 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 DSELQ8IZU8 1212 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TRPV1Q8NER1 839 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TUBGCP5Q96RT8 1024 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TTLL2Q9BWV7 592 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC2A11Q9BYW1 496 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 NOD2Q9HC29 1040 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 KRT84Q9NSB2 600 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ARMCX1Q9P291 453 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 CCDC162PA2VCL2 907 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 HEPACAM2A8MVW5 462 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 KCNA5P22460 613 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 FASP25445 335 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 TRPC1P48995 793 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 DHPSP49366 369 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 IRX1P78414 480 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 KLC1Q07866 573 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 FASTKD3Q14CZ7 662 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 ATG16L2Q8NAA4 619 aa9.37□□□□□ -0.91
CLTCL1-208ENST00000615606 AVL9Q8NBF6 648 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms