RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SDK1Q7Z5N4 2213 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PRR23AA6NEV1 266 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 OR2AG2A6NM03 316 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GAPDHSO14556 408 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 ZNF197O14709 1029 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 AIM2O14862 343 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CFLARO15519 480 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GRID2O43424 1007 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 VPS26AO75436 327 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 KATNA1O75449 491 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ECI2O75521 394 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 POP4O95707 220 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 PENKP01210 267 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 APOA4P06727 396 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CTSLP07711 333 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RBP1P09455 135 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ADH5P11766 374 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 COL6A2P12110 1019 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CES1P23141 567 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 EEF1DP29692 281 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 AKT1P31749 480 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ETV3P41162 512 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PIK3CGP48736 1102 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TTPAP49638 278 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 EPHA5P54756 1037 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SESN3P58005 492 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RAD51Q06609 339 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 DLX2Q07687 328 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 HSPA14Q0VDF9 509 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ASPHQ12797 758 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 NFATC2Q13469 925 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 LAMB3Q13751 1172 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ARHGEF7Q14155 803 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 GRIN2CQ14957 1233 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RALGPS1Q5JS13 557 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HABP4Q5JVS0 413 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 MPP7Q5T2T1 576 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ELMSAN1Q6PJG2 1045 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MBOAT1Q6ZNC8 495 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ASRGL1Q7L266 308 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CUZD1Q86UP6 607 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MYLK4Q86YV6 388 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 DDIASQ8IXT1 998 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PLCD3Q8N3E9 789 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RNF148Q8N7C7 305 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RBM15BQ8NDT2 890 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 OR6Y1Q8NGX8 325 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CFAP61Q8NHU2 1237 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 KCNV2Q8TDN2 545 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CCDC124Q96CT7 223 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 LMLNQ96KR4 655 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 LENG8Q96PV6 779 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 ACOX2Q99424 681 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SPATA16Q9BXB7 569 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MAGEE1Q9HCI5 957 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ARHGEF3Q9NR81 526 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 LATS2Q9NRM7 1088 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CD274Q9NZQ7 290 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 TBC1D14Q9P2M4 693 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SARDHQ9UL12 918 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MAFFQ9ULX9 164 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RAP2CQ9Y3L5 183 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ANKRD36A6QL64 1941 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 A0A0C4DFX4 3053 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ATXN2Q99700 1313 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 CARNS1A5YM72 827 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 MATN2O00339 956 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PRMT5O14744 637 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 HDAC3O15379 428 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HTRA2O43464 458 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 CCDC22O60826 627 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SMIM24O75264 130 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PDE5AO76074 875 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 IL1BP01584 269 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 RB1P06400 928 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SERPINA6P08185 405 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 HNRNPA1P09651 372 aaKnown RBP eCLIP3.41□□□□□ -1.86
LIG4-205ENST00000614526 MTHFD2P13995 350 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ITGALP20701 1170 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 OGNP20774 298 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 FSHRP23945 695 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PTPN4P29074 926 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PBLDP30039 288 aaPredicted RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 MNAT1P51948 309 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 KPNA2P52292 529 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 HK3P52790 923 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PRKAA2P54646 552 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 IL2P60568 153 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 ERVK-21P61565 698 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SH3BP2P78314 561 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 UBE3AQ05086 875 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CACNG1Q06432 222 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 SULT2A1Q06520 285 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CCDC15Q0P6D6 951 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 PRKAA1Q13131 559 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 CUL3Q13618 768 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 BOP1Q14137 746 aaKnown RBP3.41□□□□□ -1.86
LIG4-205ENST00000614526 TYSND1Q2T9J0 566 aa3.41□□□□□ -1.86
LIG4-205ENST00000614526 FNDC3BQ53EP0 1204 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms