RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 A0A1W2PPW3 197 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TCRBV7S3A2A0A539 114 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 WASH3PC4AMC7 463 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PLK4O00444 970 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 FAM189A1O60320 539 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PCCBP05166 539 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 HAPLN1P10915 354 aaPredicted RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 CAMK2GQ13555 558 aaPredicted RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 CHST15Q7LFX5 561 aaPredicted RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PARGQ86W56 976 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 SLC26A11Q86WA9 606 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 FBXW8Q8N3Y1 598 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PIWIL2Q8TC59 973 aaKnown RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 SLC9A7Q96T83 725 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TPSD1Q9BZJ3 242 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 SACM1LQ9NTJ5 587 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 GDAP2Q9NXN4 497 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TCRBV9S1A1TA0A576 114 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 HAS3O00219 553 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 METTL18O95568 372 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 ABHD2P08910 425 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 GLDCP23378 1020 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 IVDP26440 423 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 CLDN10P78369 228 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TRIP4Q15650 581 aaPredicted RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PFKFB4Q16877 469 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 ARSIQ5FYB1 569 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 N4BP2L1Q5TBK1 243 aaPredicted RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 ESRP1Q6NXG1 681 aaKnown RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 MILR1Q7Z6M3 343 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 BANPQ8N9N5 519 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 OR8D1Q8WZ84 308 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 GIMAP4Q9NUV9 329 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TBC1D14Q9P2M4 693 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 RABGEF1Q9UJ41 708 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TRHDEQ9UKU6 1024 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 A0A1B0GTW7 788 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 C1QTNF3-AMACRE9PGA6 284 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 CNOT3O75175 753 aaKnown RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 BCL10O95999 233 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 SERPINA6P08185 405 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 VARSP26640 1264 aaKnown RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 MC4RP32245 332 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 NAGLUP54802 743 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PGS1Q32NB8 556 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF542PQ5EBM4 170 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TNFAIP8L3Q5GJ75 292 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 MBLAC2Q68D91 279 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TMEM25Q86YD3 366 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 CENPSQ8N2Z9 138 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 TSPAN17Q96FV3 270 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PEBP4Q96S96 227 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 UPF3AQ9H1J1 476 aaKnown RBP10.79□□□□□ -0.68
FAM3A-221ENST00000612856 FAIMQ9NVQ4 179 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 ARL15Q9NXU5 204 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 DGKBQ9Y6T7 804 aa10.79□□□□□ -0.68
FAM3A-221ENST00000612856 PDLIM1O00151 329 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 LEFTY2O00292 366 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ITM2AO43736 263 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SIN3BO75182 1162 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 MFN2O95140 757 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 THRAP10827 490 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 PABPC1P11940 636 aaKnown RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF7P17097 686 aaPredicted RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 LRPAP1P30533 357 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 CD97P48960 835 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 TRPC1P48995 793 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ADAM17P78536 824 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 MSLNQ13421 630 aaPredicted RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF460Q14592 562 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ADRM1Q16186 407 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 MSS51Q4VC12 460 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 METTL21CQ5VZV1 264 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 TPGS2Q68CL5 300 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 GALNT18Q6P9A2 607 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 OOSP2Q86WS3 158 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 CLDN19Q8N6F1 224 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 KHSRPQ92945 711 aaKnown RBP eCLIP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ZBTB18Q99592 522 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 ACSS3Q9H6R3 686 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SPAG17Q6Q759 2223 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 A0A088AWK7 358 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 STX16-NPEPL1H3BU86 382 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 TAF4O00268 1085 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 MAN1A2O60476 641 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 SEC24AO95486 1093 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 COL6A2P12110 1019 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 AMD1P17707 334 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 LSM3P62310 102 aaKnown RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 PRKD1Q15139 912 aaPredicted RBP10.78□□□□□ -0.68
FAM3A-221ENST00000612856 AP5B1Q2VPB7 878 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 MTX3Q5HYI7 312 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 CDHR3Q6ZTQ4 885 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 HID1Q8IV36 788 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 CPA6Q8N4T0 437 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 METTL25Q8N6Q8 603 aa10.78□□□□□ -0.68
FAM3A-221ENST00000612856 BORCS5Q969J3 196 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms