RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 CLK3P49761 638 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 HNRNPFP52597 415 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 CDKN2DP55273 166 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 CCNA1P78396 465 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 LIPEQ05469 1076 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 AGAP9Q5VTM2 703 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 DENND5AQ6IQ26 1287 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 CYP2U1Q7Z449 544 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 UNC93AQ86WB7 457 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 ARMC8Q8IUR7 673 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 PTGR2Q8N8N7 351 aaPredicted RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 CEP295NLQ96MC4 621 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 ZNF641Q96N77 438 aaPredicted RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 SLC30A3Q99726 388 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 KCTD14Q9BQ13 255 aaPredicted RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 ALOXE3Q9BYJ1 711 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 AASSQ9UDR5 926 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 ANAPC2Q9UJX6 822 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 KCTD3Q9Y597 815 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 TTC3P53804 2025 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 MYLKQ15746 1914 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 UBXN8O00124 270 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 CCRL2O00421 344 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 TCF3P15923 654 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 LEPRP48357 1165 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 LAPTM5Q13571 262 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 PAGE3Q5JUK9 113 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 CATSPEREQ5SY80 951 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 PAQR9Q6ZVX9 377 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 LINC00523Q86TU6 105 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 PTERQ96BW5 349 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 PABPC5Q96DU9 382 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 KLRG1Q96E93 195 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 MYRFLQ96LU7 910 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 DUSP16Q9BY84 665 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 ALG2Q9H553 416 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 SMURF2Q9HAU4 748 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 SEMA4BQ9NPR2 832 aaPredicted RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 INTS7Q9NVH2 962 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 TSR3Q9UJK0 312 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 CARD8Q9Y2G2 431 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 CSADQ9Y600 493 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 ERI2A8K979 691 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 RAD51BO15315 384 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 MOCS2O96007 188 aaPredicted RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 CHRNB1P11230 501 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 HOXA11P31270 313 aaPredicted RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 RFC2P35250 354 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 RACK1P63244 317 aaKnown RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 UNC50Q53HI1 259 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 KIAA0319Q5VV43 1072 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 GTF2IRD2BQ6EKJ0 949 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 C8orf82Q6P1X6 216 aaPredicted RBP10.97□□□□□ -0.65
CDH4-202ENST00000611855 GTF2IRD2Q86UP8 949 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 MIER2Q8N344 545 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 TWIST2Q8WVJ9 160 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 COLEC11Q9BWP8 271 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 CHID1Q9BWS9 393 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 HOXD1Q9GZZ0 328 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 TRIM39Q9HCM9 518 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 AKIP1Q9NQ31 210 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 NSMCE4AQ9NXX6 385 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 TRHDEQ9UKU6 1024 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 PCDHB3Q9Y5E6 796 aa10.97□□□□□ -0.65
CDH4-202ENST00000611855 AQP12BA6NM10 295 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 XPNPEP2O43895 674 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 CCNKO75909 580 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 PSMB9P28065 219 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 ATP6V0D1P61421 351 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 NCS1P62166 190 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 LRIT3Q3SXY7 679 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 HECTD2Q5U5R9 776 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 THAP5Q7Z6K1 395 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 AQP12AQ8IXF9 295 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 C8orf59Q8N0T1 100 aaPredicted RBP10.96□□□□□ -0.65
CDH4-202ENST00000611855 CRYBG2Q8N1P7 616 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 DEPDC4Q8N2C3 294 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 ATPAF2Q8N5M1 289 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 SLC22A17Q8WUG5 538 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 FIG4Q92562 907 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 ITCHQ96J02 903 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 ZFYVE19Q96K21 471 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 DMRTB1Q96MA1 342 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 RMND5AQ9H871 391 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 PRDM8Q9NQV8 689 aa10.96□□□□□ -0.65
CDH4-202ENST00000611855 RBM22Q9NW64 420 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDH4-202ENST00000611855 A0A087X1B8 175 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 C16orf96A6NNT2 1141 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 TNFRSF10AO00220 468 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 NDUFS2O75306 463 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 CDK14O94921 469 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 HLA-DQB2P05538 268 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 PIRTP0C851 137 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 GTF2E2P29084 291 aaKnown RBP10.96□□□□□ -0.66
CDH4-202ENST00000611855 E2F2Q14209 437 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 FAM187BQ17R55 369 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.66
CDH4-202ENST00000611855 SPATC1Q76KD6 591 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms