RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 YTHDF1Q9BYJ9 559 aaKnown RBP11.84□□□□□ -0.51
CTCFL-217ENST00000608425 MMP28Q9H239 520 aa11.84□□□□□ -0.51
CTCFL-217ENST00000608425 POLR2AP24928 1970 aaKnown RBP11.84□□□□□ -0.51
CTCFL-217ENST00000608425 MT-CO1P00395 513 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 PSAPP07602 524 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 TRAP1Q12931 704 aaKnown RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 AGKQ53H12 422 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 FAM209BQ5JX69 171 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 LIPIQ6XZB0 460 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 ANKS3Q6ZW76 656 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 BNIPLQ7Z465 357 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 SPNS2Q8IVW8 549 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 MCPH1Q8NEM0 835 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 OR7D4Q8NG98 312 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 ITCHQ96J02 903 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 ZNF300Q96RE9 604 aaPredicted RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 RHNO1Q9BSD3 238 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 DHX35Q9H5Z1 703 aaKnown RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 RSAD1Q9HA92 442 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 ZBTB20Q9HC78 741 aaPredicted RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 JPH1Q9HDC5 661 aaPredicted RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 FAM105AQ9NUU6 356 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 ERVK13-1Q9NX77 482 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 SLC23A1Q9UHI7 598 aa11.83□□□□□ -0.51
CTCFL-217ENST00000608425 EVLQ9UI08 416 aaPredicted RBP11.83□□□□□ -0.51
CTCFL-217ENST00000608425 E5RI56 91 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 G3V2L1 256 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 DGAT1O75907 488 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 RGS20O76081 388 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 NCK1P16333 377 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TYK2P29597 1187 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 BTN1A1Q13410 526 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TFDP2Q14188 446 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 BTBD16Q32M84 506 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 CYP27C1Q4G0S4 372 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 GRTP1Q5TC63 336 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 LIN9Q5TKA1 542 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 DARS2Q6PI48 645 aaKnown RBP11.83□□□□□ -0.52
CTCFL-217ENST00000608425 CFAP77Q6ZQR2 320 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 RBM23Q86U06 439 aaKnown RBP11.83□□□□□ -0.52
CTCFL-217ENST00000608425 NLRP8Q86W28 1048 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 PLD3Q8IV08 490 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 CDKL2Q92772 493 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TRMT61AQ96FX7 289 aaKnown RBP11.83□□□□□ -0.52
CTCFL-217ENST00000608425 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 LPIN3Q9BQK8 851 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 SH2D3AQ9BRG2 576 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 ASPSCR1Q9BZE9 553 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 ILKAPQ9H0C8 392 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TBX20Q9UMR3 447 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 PDE10AQ9Y233 779 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TMEM150BA6NC51 233 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 SLC16A4O15374 487 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 GPR50Q13585 617 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 ZNF517Q6ZMY9 492 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TRMT1LQ7Z2T5 733 aaKnown RBP11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 IFNEQ86WN2 208 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 RFX6Q8HWS3 928 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 CHDHQ8NE62 594 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-217ENST00000608425 CHST13Q8NET6 341 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 LGALS12Q96DT0 336 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 ZHX1-C8orf76Q96EF9 292 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 TRIM15Q9C019 465 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 DNAI2Q9GZS0 605 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 CAB39LQ9H9S4 337 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 ZNF224Q9NZL3 707 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 EHD3Q9NZN3 535 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 SLC9A2Q9UBY0 812 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 DPP7Q9UHL4 492 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 CDYLQ9Y232 598 aa11.83□□□□□ -0.52
CTCFL-217ENST00000608425 LRRC37A2A6NM11 1700 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 MEIOCA2RUB1 952 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 TRDMT1O14717 391 aaKnown RBP11.82□□□□□ -0.52
CTCFL-217ENST00000608425 STBD1O95210 358 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 IL10P22301 178 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 DNAJB2P25686 324 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 PSMB9P28065 219 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 PPIL2Q13356 520 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 CBX2Q14781 532 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-217ENST00000608425 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
CTCFL-217ENST00000608425 C6orf141Q5SZD1 244 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 CES3Q6UWW8 571 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 PAMR1Q6UXH9 720 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 THAP5Q7Z6K1 395 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 P2RY8Q86VZ1 359 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 VANGL1Q8TAA9 524 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-217ENST00000608425 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-217ENST00000608425 AFG1LQ8WV93 481 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 TOP1MTQ969P6 601 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 SLC45A3Q96JT2 553 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 NODALQ96S42 347 aa11.82□□□□□ -0.52
CTCFL-217ENST00000608425 CEP41Q9BYV8 373 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms