RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 TRIM59Q8IWR1 403 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 BBS7Q8IWZ6 715 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 CMTR2Q8IYT2 770 aaKnown RBP4.71□□□□□ -1.65
LINC01109-201ENST00000603837 DNAAF3Q8N9W5 541 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 ELOA3Q8NG57 546 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 METTL6Q8TCB7 284 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 CREB3L4Q8TEY5 395 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 SLC5A11Q8WWX8 675 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 CPT1BQ92523 772 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 SNX19Q92543 992 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 JADE3Q92613 823 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 FBXO32Q969P5 355 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 DCAF5Q96JK2 942 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 SNX18Q96RF0 628 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 CDRT15Q96T59 188 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 CHID1Q9BWS9 393 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 SLA2Q9H6Q3 261 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 C17orf75Q9HAS0 396 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 TDP1Q9NUW8 608 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 P4HTMQ9NXG6 502 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 WWOXQ9NZC7 414 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 DTLQ9NZJ0 730 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 SERPINB13Q9UIV8 391 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF229Q9UJW7 825 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 PLAGL2Q9UPG8 496 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 SNX24Q9Y343 169 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 RIPK3Q9Y572 518 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 AP4S1Q9Y587 144 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 PCDHA10Q9Y5I2 948 aa4.71□□□□□ -1.65
LINC01109-201ENST00000603837 OR2AG2A6NM03 316 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MEI4A8MW99 385 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 BTBD18B2RXH4 712 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 H3BMQ9 156 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CYP26A1O43174 497 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MED24O75448 989 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GDF11O95390 407 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 IFNA16P05015 189 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MMP2P08253 660 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 NFICP08651 508 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 HNRNPA1P09651 372 aaKnown RBP eCLIP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PFKLP17858 780 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ITGB6P18564 788 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 IL11P20809 199 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CYP3A5P20815 502 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TGM1P22735 817 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GCH1P30793 250 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 HNRNPH3P31942 346 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ICAM3P32942 547 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TRHRP34981 398 aaPredicted RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TALDO1P37837 337 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MAGEA11P43364 429 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 HARS2P49590 506 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GNG10P50151 68 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CYP4F2P78329 520 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CYP4F3Q08477 520 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GRSF1Q12849 480 aaKnown RBP eCLIP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TRAF2Q12933 501 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TARDBPQ13148 414 aaKnown RBP eCLIP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CHIT1Q13231 466 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 SLC39A12Q504Y0 691 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PLA1AQ53H76 456 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TDRD12Q587J7 1177 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 FAM76BQ5HYJ3 339 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 FGD3Q5JSP0 725 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF425Q6IV72 752 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 FSTL4Q6MZW2 842 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 UGT3A1Q6NUS8 523 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CASC4Q6P4E1 433 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 NOTUMQ6P988 496 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ZDHHC24Q6UX98 284 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CHSY3Q70JA7 882 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 FKBP9P1Q75LS8 142 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GSTA5Q7RTV2 222 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 SZRD1Q7Z422 152 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF438Q7Z4V0 828 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 KBTBD6Q86V97 674 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CATSPER3Q86XQ3 398 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ERO1BQ86YB8 467 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GSTCDQ8NEC7 633 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 VANGL1Q8TAA9 524 aaPredicted RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ENKURQ8TC29 256 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 BTN2A2Q8WVV5 523 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 USP7Q93009 1102 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 B3GALT6Q96L58 329 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ZNF512Q96ME7 567 aaPredicted RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CLSTN3Q9BQT9 956 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 SEC22CQ9BRL7 303 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CD244Q9BZW8 370 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 RNF32Q9H0A6 362 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TMOD3Q9NYL9 352 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ANKFY1Q9P2R3 1169 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CYB5R1Q9UHQ9 305 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 CDC14AQ9UNH5 594 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 PIN4Q9Y237 131 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 MAN2B2Q9Y2E5 1009 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 A0A0G2JND7 137 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 ADARB2-AS1A8MUL3 147 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 TEX46H3BTG2 121 aa4.71□□□□□ -1.66
LINC01109-201ENST00000603837 GTPBP1O00178 669 aaKnown RBP4.71□□□□□ -1.66
LINC01109-201ENST00000603837 AURKAO14965 403 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 1102.2 ms