RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TUBA4AP68366 448 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FRRS1Q6ZNA5 592 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PGAM4Q8N0Y7 254 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 MINDY2Q8NBR6 621 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PNPT1Q8TCS8 783 aaKnown RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 NXNL1Q96CM4 212 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 MCCC1Q96RQ3 725 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 AARSD1Q9BTE6 412 aaKnown RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 FBXO5Q9UKT4 447 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 AGO1Q9UL18 857 aaKnown RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 SP100P23497 879 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-217ENST00000602723 PEX2P28328 305 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 RAP1GAP2Q684P5 730 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 RAB2BQ8WUD1 216 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 ALG3Q92685 438 aa9.56□□□□□ -0.88
CSMD1-217ENST00000602723 TFPIP10646 304 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 HTR1BP28222 390 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PTPN20Q4JDL3 420 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ANKRD52Q8NB46 1076 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 OR10H5Q8NGA6 315 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 OR52J3Q8NH60 311 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SLC44A1Q8WWI5 657 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 C18orf25Q96B23 403 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PTPRZ1P23471 2315 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SCAMP3O14828 347 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 IGFALSP35858 605 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PSEN2P49810 448 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CHSY3Q70JA7 882 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SPAG16Q8N0X2 631 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MGME1Q9BQP7 344 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 GIN1Q9NXP7 522 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 VWA7Q9Y334 891 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 IPO13O94829 963 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 AMHP03971 560 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CDH5P33151 784 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SNX20Q7Z614 316 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 FAM83AQ86UY5 434 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SATL1Q86VE3 508 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 GPR65Q8IYL9 337 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 EZH1Q92800 747 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CENPNQ96H22 339 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ZC3H10Q96K80 434 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SPON1Q9HCB6 807 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 UPB1Q9UBR1 384 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MRTO4Q9UKD2 239 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SLC27A6Q9Y2P4 619 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 C1orf167Q5SNV9 1468 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CABYRO75952 493 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MATKP42679 507 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SSR2P43308 183 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 FMO1Q01740 532 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 TMC8Q8IU68 726 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 DMRTB1Q96MA1 342 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 LRTM1Q9HBL6 345 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MOV10Q9HCE1 1003 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 A0A075B6Q4 140 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PRMT5O14744 637 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 GATBO75879 557 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SLC25A14O95258 325 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ELFN1P0C7U0 828 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CBX2Q14781 532 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PABPC1LQ4VXU2 614 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 VANGL1Q8TAA9 524 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 HSFY1Q96LI6 401 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PRDM12Q9H4Q4 367 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 TMEM134Q9H6X4 195 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 DNAJC11Q9NVH1 559 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 TRPS1Q9UHF7 1281 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PRKAB1Q9Y478 270 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CEMIPQ8WUJ3 1361 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ANKRD63C9JTQ0 380 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CCNDBP1O95273 360 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 IL1BP01584 269 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MT-ND1P03886 318 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF806P0C7X5 589 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 MMP14P50281 582 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 POTEHQ6S545 545 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 SIPA1Q96FS4 1042 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ART5Q96L15 291 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PLEKHA1Q9HB21 404 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 TRPV2Q9Y5S1 764 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 NDUFS2O75306 463 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 REM1O75628 298 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 DNASE1L1P49184 302 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CCNYL2Q5T2Q4 361 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 CAPN13Q6MZZ7 669 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 BEND5Q7L4P6 421 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ARMC10Q8N2F6 343 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PIGXQ8TBF5 258 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 C3orf14Q9HBI5 128 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 PTTG2Q9NZH5 202 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 LOXHD1Q8IVV2 1947 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 RCCD1A6NED2 376 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ANXA2P2A6NMY6 339 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 GCATO75600 419 aa9.55□□□□□ -0.88
CSMD1-217ENST00000602723 ANXA2P07355 339 aaKnown RBP9.55□□□□□ -0.88
CSMD1-217ENST00000602723 GNPDA1P46926 289 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms