RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 REV3LO60673 3130 aa17.52■□□□□ 0.39
SHKBP1-224ENST00000600718 RNASEH1O60930 286 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 RBP1P09455 135 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 ELFN1P0C7U0 828 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 MYL2P10916 166 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 ADRB3P13945 408 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 CA5AP35218 305 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 TIE1P35590 1138 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 WASP42768 502 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 METAP1P53582 386 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SDE2Q6IQ49 451 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 UGT3A1Q6NUS8 523 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 Q6ZVL8 140 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 TECPR1Q7Z6L1 1165 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 C10orf107Q8IVU9 208 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SPATA6LQ8N4H0 392 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 PPP1R14CQ8TAE6 165 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 ANKRD49Q8WVL7 239 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 KCNJ9Q92806 393 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 RAB7BQ96AH8 199 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 CDX2Q99626 313 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 RSPH9Q9H1X1 276 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 MRPL46Q9H2W6 279 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 ZDHHC3Q9NYG2 299 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 MED16Q9Y2X0 877 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 OAS3Q9Y6K5 1087 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 PIAS3Q9Y6X2 628 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SCN8AQ9UQD0 1980 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 ZNF106Q9H2Y7 1883 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 TARM1B6A8C7 271 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 H3BMM5 538 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 AREL1O15033 823 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SYNCRIPO60506 623 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 GLULP15104 373 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 DRD1P21728 446 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 KCNA4P22459 653 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 GLRBP48167 497 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 PSMD8P48556 350 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SEC13P55735 322 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 STX3Q13277 289 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 ATP13A5Q4VNC0 1218 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 TMEM196Q5HYL7 178 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 ZYG11AQ6WRX3 759 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 HLA-CQ95604 372 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SEC16BQ96JE7 1060 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 TSSK1BQ9BXA7 367 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SPATA16Q9BXB7 569 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 CPSF2Q9P2I0 782 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 GNPTGQ9UJJ9 305 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 TICRRQ7Z2Z1 1910 aa17.51■□□□□ 0.39
SHKBP1-224ENST00000600718 SNX3O60493 162 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 SBK3P0C264 359 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 FGF3P11487 239 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 ZNF37AP17032 561 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 CHRM3P20309 590 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 GRK2P25098 689 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 NTSR1P30989 418 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 LIG3P49916 1009 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 PRKAA2P54646 552 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 GRSF1Q12849 480 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 PON2Q15165 354 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 TMEM52BQ4KMG9 183 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 SETMARQ53H47 684 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 PTRHD1Q6GMV3 140 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 TRAM1L1Q8N609 369 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 GPR21Q99679 349 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 HEBP1Q9NRV9 189 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 CD84Q9UIB8 345 aa17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 TRMT6Q9UJA5 497 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 ATXN2Q99700 1313 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-224ENST00000600718 E5RI56 91 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 SPINT1O43278 529 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 NIPSNAP2O75323 286 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 SERPINE1P05121 402 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 RALBP11234 206 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 ETV3P41162 512 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 NSG1P42857 185 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 PFKPQ01813 784 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 BST1Q10588 318 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 ACOX1Q15067 660 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 SMAD2Q15796 467 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 TECRLQ5HYJ1 363 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 PAQR3Q6TCH7 311 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 MACC1Q6ZN28 852 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 OTOAQ7RTW8 1153 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 CACNA2D3Q8IZS8 1091 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 NKAPQ8N5F7 415 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 COQ10AQ96MF6 247 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 COPS8Q99627 209 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 SMOXQ9NWM0 555 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 OXSMQ9NWU1 459 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 XPR1Q9UBH6 696 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 ITM2BQ9Y287 266 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 ANKRD65E5RJM6 399 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 TK2O00142 265 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 WNT9AO14904 365 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 TRIM13O60858 407 aa17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 H2AFYO75367 372 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-224ENST00000600718 ADH1BP00325 375 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms