RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PCDHA13Q9Y5I0 950 aa15.65■□□□□ 0.1
VRK3-221ENST00000600284 OR5K4A6NMS3 321 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 GRID2O43424 1007 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 SLC25A14O95258 325 aaPredicted RBP15.64■□□□□ 0.09
VRK3-221ENST00000600284 MT-CYBP00156 380 aaPredicted RBP15.64■□□□□ 0.09
VRK3-221ENST00000600284 EPOP01588 193 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 CYLC1P35663 651 aaPredicted RBP15.64■□□□□ 0.09
VRK3-221ENST00000600284 C16orf72Q14CZ0 275 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 SPA17Q15506 151 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 PCSK7Q16549 785 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 C11orf63Q6NUN7 778 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 TMEM71Q6P5X7 295 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 PCSK4Q6UW60 755 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 SLC9B2Q86UD5 537 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 SPATA22Q8NHS9 363 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 SLC37A2Q8TED4 501 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 USP7Q93009 1102 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 RBM41Q96IZ5 413 aaKnown RBP15.64■□□□□ 0.09
VRK3-221ENST00000600284 SLC38A3Q99624 504 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 GPR63Q9BZJ6 419 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 TRABDQ9H4I3 376 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 PDP2Q9P2J9 529 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 ATXN10Q9UBB4 475 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 SAE1Q9UBE0 346 aaPredicted RBP15.64■□□□□ 0.09
VRK3-221ENST00000600284 FAM153AQ9UHL3 310 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 SHOC2Q9UQ13 582 aa15.64■□□□□ 0.09
VRK3-221ENST00000600284 PCYT1BQ9Y5K3 369 aaPredicted RBP15.64■□□□□ 0.09
VRK3-221ENST00000600284 hCG_1818297A0A087WSY0 165 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 KIR2DS5A0A0G2JLQ3 304 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 PRAMEF33A0A0G2JMD5 474 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 A0A0G2JNG1 304 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 LOC285095A0A1B0GVY8 99 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 HACD1B0YJ81 288 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.63■□□□□ 0.09
VRK3-221ENST00000600284 KIR2DS3K7RE56 304 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 CHUKO15111 745 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 PRAMEF10O60809 474 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 CD68P34810 354 aaPredicted RBP15.63■□□□□ 0.09
VRK3-221ENST00000600284 ETV5P41161 510 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 MAPK10P53779 464 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 HHEXQ03014 270 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 WASHC5Q12768 1159 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 KIR2DS5Q14953 304 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 TAF1BQ53T94 588 aaPredicted RBP15.63■□□□□ 0.09
VRK3-221ENST00000600284 KAZNQ674X7 775 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 AGBL5Q8NDL9 886 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 OR10G6Q8NH81 332 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 DTX3LQ8TDB6 740 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 GLYATL1Q969I3 302 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 AHCYL2Q96HN2 611 aaKnown RBP15.63■□□□□ 0.09
VRK3-221ENST00000600284 CCDC74BQ96LY2 380 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 PLEKHG4BQ96PX9 1271 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.63■□□□□ 0.09
VRK3-221ENST00000600284 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.63■□□□□ 0.09
VRK3-221ENST00000600284 TBC1D29Q9UFV1 150 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 PRKAB1Q9Y478 270 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 PCDHB11Q9Y5F2 797 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 PCDHGA3Q9Y5H0 932 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 ADGRG1Q9Y653 693 aa15.63■□□□□ 0.09
VRK3-221ENST00000600284 SCN8AQ9UQD0 1980 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 TRBV23OR9-2A0A075B6M9 112 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 A6NCN8 305 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 C9orf172C9J069 976 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 VEGFDO43915 354 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 PMPCBO75439 489 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 EML2O95834 649 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 PIRTP0C851 137 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 THRAP10827 490 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 ACP5P13686 325 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 F3P13726 295 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 PECAM1P16284 738 aaPredicted RBP15.62■□□□□ 0.09
VRK3-221ENST00000600284 ZNF8P17098 575 aaPredicted RBP15.62■□□□□ 0.09
VRK3-221ENST00000600284 BPIP17213 487 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 CSTF2P33240 577 aaKnown RBP eCLIP15.62■□□□□ 0.09
VRK3-221ENST00000600284 HMGCLP35914 325 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 TNNT3P45378 269 aaPredicted RBP15.62■□□□□ 0.09
VRK3-221ENST00000600284 EPHA4P54764 986 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 COPS2P61201 443 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 CFHR1Q03591 330 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 ADCY2Q08462 1091 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 PPP2R5EQ16537 467 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 NKAIN2Q5VXU1 208 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 ZDHHC20Q5W0Z9 365 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 WDR74Q6RFH5 385 aaPredicted RBP15.62■□□□□ 0.09
VRK3-221ENST00000600284 B4GALNT4Q76KP1 1039 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 ADGRG6Q86SQ4 1221 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 DTX1Q86Y01 620 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 PHYKPLQ8IUZ5 450 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 RCBTB1Q8NDN9 531 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 CCDC112Q8NEF3 446 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 TTC9Q92623 222 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 VPS35Q96QK1 796 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 PANX2Q96RD6 677 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 FCRL5Q96RD9 977 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 TAAR9Q96RI9 348 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 OR2AG1Q9H205 316 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 EPB41L1Q9H4G0 881 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 TRHDEQ9UKU6 1024 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 KCNK6Q9Y257 313 aa15.62■□□□□ 0.09
VRK3-221ENST00000600284 FASNP49327 2511 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms