RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SH3KBP1Q96B97 665 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 RNF31Q96EP0 1072 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 AHCYL2Q96HN2 611 aaKnown RBP6.04□□□□□ -1.44
VRK3-220ENST00000600259 TRIM55Q9BYV6 548 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 EPB41L1Q9H4G0 881 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 RMI1Q9H9A7 625 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 LRRC4CQ9HCJ2 640 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 PRDM8Q9NQV8 689 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 GOLGA6AQ9NYA3 693 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 DTLQ9NZJ0 730 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 VPS18Q9P253 973 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 SEMA5BQ9P283 1151 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 ZNF624Q9P2J8 865 aaPredicted RBP6.04□□□□□ -1.44
VRK3-220ENST00000600259 PLEKHB1Q9UF11 243 aaPredicted RBP6.04□□□□□ -1.44
VRK3-220ENST00000600259 DACH1Q9UI36 760 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 CROTQ9UKG9 612 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 KCNK6Q9Y257 313 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 CHKBQ9Y259 395 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 MAP4K5Q9Y4K4 846 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 ABCA12Q86UK0 2595 aa6.04□□□□□ -1.44
VRK3-220ENST00000600259 HIVEP3Q5T1R4 2406 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 WIPF3A6NGB9 483 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 OR5K4A6NMS3 321 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 TMCO5BA8MYB1 307 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 MKRN2OSH3BPM6 223 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 H3BRJ5 948 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 CHUKO15111 745 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 TOX3O15405 576 aaPredicted RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 GRID2O43424 1007 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 KIF1CO43896 1103 aaKnown RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 NUAK1O60285 661 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 SEMA7AO75326 666 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 SPAG6O75602 509 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 CREG1O75629 220 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 KIAA0754O94854 1291 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 TIAF1O95411 115 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ASMTLO95671 621 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 FTLP02792 175 aaPredicted RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 PYGLP06737 847 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 MMP2P08253 660 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ACP5P13686 325 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 BRAFP15056 766 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 FERP16591 822 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ZNF8P17098 575 aaPredicted RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 GNLYP22749 145 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 MAN1A1P33908 653 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 DLSTP36957 453 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 MMP13P45452 471 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 LEPRP48357 1165 aaKnown RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 PMS2P54278 862 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 DSC2Q02487 901 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 SEMA5AQ13591 1074 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 SEPT6Q14141 434 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 IL11RAQ14626 422 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 QPCTQ16769 361 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 FKBP15Q5T1M5 1219 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ZNF648Q5T619 568 aaPredicted RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 PAPD7Q5XG87 772 aaKnown RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 CRYBG3Q68DQ2 2970 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 TMCO3Q6UWJ1 677 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ABRAXAS1Q6UWZ7 409 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 TMEM26Q6ZUK4 368 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ZNF571Q7Z3V5 609 aaPredicted RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 SLC9B2Q86UD5 537 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ATCAYQ86WG3 371 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 LRRC49Q8IUZ0 686 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 PAF1Q8N7H5 531 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 FATE1Q969F0 183 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 TSGA13Q96PP4 275 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 RUFY1Q96T51 708 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 HERPUD2Q9BSE4 406 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 MFRPQ9BY79 579 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 ISCUQ9H1K1 167 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 CARD9Q9H257 536 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 FAM83DQ9H4H8 585 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 ZNF768Q9H5H4 540 aaKnown RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 ZWILCHQ9H900 591 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 PCDH18Q9HCL0 1135 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 NT5MQ9NPB1 228 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 SEPT11Q9NVA2 429 aaKnown RBP6.03□□□□□ -1.44
VRK3-220ENST00000600259 ATXN10Q9UBB4 475 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 EPHA6Q9UF33 1036 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 KLHL3Q9UH77 587 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 TMPRSS11EQ9UL52 423 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 PADI1Q9ULC6 663 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 MYO6Q9UM54 1294 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 POLHQ9Y253 713 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 CACNA1DQ01668 2161 aa6.03□□□□□ -1.44
VRK3-220ENST00000600259 MED13Q9UHV7 2174 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 RGSL1A5PLK6 1076 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 ANKRD66B4E2M5 251 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 MATN3O15232 486 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SNX2O60749 519 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 KATNA1O75449 491 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 RFPL1O75677 317 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 CEACAM4O75871 244 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 DNAJB5O75953 348 aa6.02□□□□□ -1.45
VRK3-220ENST00000600259 SORBS2O94875 1100 aaKnown RBP6.02□□□□□ -1.45
VRK3-220ENST00000600259 UBXN7O94888 489 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms