RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 TARDBPQ13148 414 aaKnown RBP eCLIP27.9■■■□□ 2.06
SSBP4-206ENST00000599699 LRP8Q14114 963 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 GSE1Q14687 1217 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 GSTA5Q7RTV2 222 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 PRUNE1Q86TP1 453 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 SFTPA2Q8IWL1 248 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 OR4K2Q8NGD2 314 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 OR6C4Q8NGE1 309 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 CCDC74AQ96AQ1 378 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 CCDC3Q9BQI4 270 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 ARNT2Q9HBZ2 717 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 KCTD3Q9Y597 815 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 ST14Q9Y5Y6 855 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 PTPRBP23467 1997 aa27.9■■■□□ 2.06
SSBP4-206ENST00000599699 GRID2O43424 1007 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 NUAK1O60285 661 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 NOBOXO60393 691 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 MTX2O75431 263 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 PDE1BQ01064 536 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 C14orf28Q4W4Y0 310 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 ADGRG6Q86SQ4 1221 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 PBKQ96KB5 322 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 VPS35Q96QK1 796 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 ETNK1Q9HBU6 452 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 HOMER3Q9NSC5 361 aa27.89■■■□□ 2.06
SSBP4-206ENST00000599699 PCYT1BQ9Y5K3 369 aaPredicted RBP27.89■■■□□ 2.06
SSBP4-206ENST00000599699 UGT1A9O60656 530 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 ACP5P13686 325 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 TPH1P17752 444 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A6P19224 532 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A1P22309 533 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A4P22310 534 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A3P35503 534 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A5P35504 534 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 BIRC2Q13490 618 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 ITGA9Q13797 1035 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 DRICH1Q6PGQ1 229 aaPredicted RBP27.88■■■□□ 2.05
SSBP4-206ENST00000599699 LINC00523Q86TU6 105 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 TTC25Q96NG3 672 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 TMEM121BQ9BXQ6 578 aaPredicted RBP27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A7Q9HAW7 530 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A10Q9HAW8 530 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 UGT1A8Q9HAW9 530 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 RAB6BQ9NRW1 208 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 PIH1D1Q9NWS0 290 aaKnown RBP27.88■■■□□ 2.05
SSBP4-206ENST00000599699 PAK5Q9P286 719 aa27.88■■■□□ 2.05
SSBP4-206ENST00000599699 DRG1Q9Y295 367 aaKnown RBP27.88■■■□□ 2.05
SSBP4-206ENST00000599699 GPR89AB7ZAQ6 455 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 GPR89BP0CG08 455 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 TMPRSS15P98073 1019 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 GTF2H3Q13889 308 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 SEPT6Q14141 434 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 CRTC3Q6UUV7 619 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 DTX3LQ8TDB6 740 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 FKBPLQ9UIM3 349 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 TMPRSS11EQ9UL52 423 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 KCNK6Q9Y257 313 aa27.87■■■□□ 2.05
SSBP4-206ENST00000599699 ERI2A8K979 691 aaKnown RBP27.86■■■□□ 2.05
SSBP4-206ENST00000599699 VEGFDO43915 354 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 CDK14O94921 469 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 ECEL1O95672 775 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 ZSCAN5DPP0CG00 497 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 GLB1P16278 677 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 KCNJ1P48048 391 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 MAZP56270 477 aaKnown RBP27.86■■■□□ 2.05
SSBP4-206ENST00000599699 MSLNQ13421 630 aaPredicted RBP27.86■■■□□ 2.05
SSBP4-206ENST00000599699 HLTFQ14527 1009 aaKnown RBP eCLIP27.86■■■□□ 2.05
SSBP4-206ENST00000599699 CERCAMQ5T4B2 595 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 PPP1R21Q6ZMI0 780 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 DCBLD1Q8N8Z6 715 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 Q8N9G6 341 aaPredicted RBP27.86■■■□□ 2.05
SSBP4-206ENST00000599699 DNAAF3Q8N9W5 541 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 GLIS1Q8NBF1 620 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 OR13C4Q8NGS5 318 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 MS4A14Q96JA4 679 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 DEPDC7Q96QD5 511 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 LRIT1Q9P2V4 623 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 RABGEF1Q9UJ41 708 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 APPL1Q9UKG1 709 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 RNF215Q9Y6U7 377 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 FRYQ5TBA9 3013 aa27.86■■■□□ 2.05
SSBP4-206ENST00000599699 TRABD2BA6NFA1 517 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 GPR39O43194 453 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 PRAMEF1O95521 474 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 GAS8O95995 478 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 PROS1P07225 676 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 POU6F1Q14863 301 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 KHDC1Q4VXA5 237 aaKnown RBP27.85■■■□□ 2.05
SSBP4-206ENST00000599699 LDLRAP1Q5SW96 308 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 CDCP2Q5VXM1 449 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 ZNF398Q8TD17 642 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 PATE1Q8WXA2 126 aa27.85■■■□□ 2.05
SSBP4-206ENST00000599699 ZCCHC2Q9C0B9 1178 aaKnown RBP27.85■■■□□ 2.05
SSBP4-206ENST00000599699 SCN8AQ9UQD0 1980 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 USP27XA6NNY8 438 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 RHPN2P1A8MT19 583 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 GAPDHSO14556 408 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-206ENST00000599699 RPL22P35268 128 aaKnown RBP27.84■■■□□ 2.05
SSBP4-206ENST00000599699 HADHAP40939 763 aa27.84■■■□□ 2.05
SSBP4-206ENST00000599699 ZNF140P52738 457 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms