RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PRKAB1Q9Y478 270 aa13.72□□□□□ -0.21
UPF1-205ENST00000598209 KCTD3Q9Y597 815 aa13.72□□□□□ -0.21
UPF1-205ENST00000598209 PCYT1BQ9Y5K3 369 aaPredicted RBP13.72□□□□□ -0.21
UPF1-205ENST00000598209 ST14Q9Y5Y6 855 aa13.72□□□□□ -0.21
UPF1-205ENST00000598209 COL27A1Q8IZC6 1860 aaPredicted RBP13.72□□□□□ -0.21
UPF1-205ENST00000598209 UNC13CQ8NB66 2214 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 GLYATL1P3A0A0U1RQE8 302 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.21
UPF1-205ENST00000598209 E7EVH7 732 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 NUAK1O60285 661 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 OPA1O60313 960 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 NOBOXO60393 691 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 ZSCAN5DPP0CG00 497 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 JUPP14923 745 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 ZNF8P17098 575 aaPredicted RBP13.71□□□□□ -0.21
UPF1-205ENST00000598209 TPH1P17752 444 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 RPL22P35268 128 aaKnown RBP13.71□□□□□ -0.21
UPF1-205ENST00000598209 ACTR1BP42025 376 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 KCNJ1P48048 391 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 LMAN1P49257 510 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 ACTR1AP61163 376 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 PDE1BQ01064 536 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 LRP8Q14114 963 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 OGFOD3Q6PK18 319 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 ADGRG6Q86SQ4 1221 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 LINC00523Q86TU6 105 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 SFTPA2Q8IWL1 248 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 PRELID2Q8N945 189 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 MAPK15Q8TD08 544 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 ZDHHC1Q8WTX9 485 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 GATA6Q92908 595 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 OSBPL9Q96SU4 736 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 FKBPLQ9UIM3 349 aa13.71□□□□□ -0.21
UPF1-205ENST00000598209 GPR89AB7ZAQ6 455 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 GAPDHSO14556 408 aaPredicted RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 GPR39O43194 453 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 GRID2O43424 1007 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A9O60656 530 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 MTX2O75431 263 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 GPR89BP0CG08 455 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A6P19224 532 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A1P22309 533 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A4P22310 534 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A3P35503 534 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A5P35504 534 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 ZNF140P52738 457 aaPredicted RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 SEMA5AQ13591 1074 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 PEX6Q13608 980 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 ITGA9Q13797 1035 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 KHDC1Q4VXA5 237 aaKnown RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 C14orf28Q4W4Y0 310 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 CHST15Q7LFX5 561 aaPredicted RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 OR52K1Q8NGK4 314 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 OR13C4Q8NGS5 318 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 GDAP1Q8TB36 358 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 COG1Q8WTW3 980 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 CCDC74AQ96AQ1 378 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 CNTNAP3BQ96NU0 1288 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 NAP1L3Q99457 506 aaPredicted RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 CNTNAP3Q9BZ76 1288 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 ABCG4Q9H172 646 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A7Q9HAW7 530 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A10Q9HAW8 530 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 UGT1A8Q9HAW9 530 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 PIH1D1Q9NWS0 290 aaKnown RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 TTC7AQ9ULT0 858 aaPredicted RBP13.7□□□□□ -0.22
UPF1-205ENST00000598209 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
UPF1-205ENST00000598209 C1QTNF9BB2RNN3 333 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 PGRMC1O00264 195 aaKnown RBP13.69□□□□□ -0.22
UPF1-205ENST00000598209 CHUKO15111 745 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 LDB2O43679 373 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 VEGFDO43915 354 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 SUN1O94901 812 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 CDK14O94921 469 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 PRAMEF1O95521 474 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 MT-CO3P00414 261 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 C1QTNF9P0C862 333 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 ACP5P13686 325 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 CA5AP35218 305 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 MAZP56270 477 aaKnown RBP13.69□□□□□ -0.22
UPF1-205ENST00000598209 TMPRSS15P98073 1019 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 CDH17Q12864 832 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 TARDBPQ13148 414 aaKnown RBP eCLIP13.69□□□□□ -0.22
UPF1-205ENST00000598209 SEPT6Q14141 434 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 HLTFQ14527 1009 aaKnown RBP eCLIP13.69□□□□□ -0.22
UPF1-205ENST00000598209 POU6F1Q14863 301 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 LDLRAP1Q5SW96 308 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 CRTC3Q6UUV7 619 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 UNQ6494/PRO21346Q6UXR6 183 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 C4orf22Q6V702 233 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 PPP1R21Q6ZMI0 780 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 OR6C4Q8NGE1 309 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 ZNF398Q8TD17 642 aa13.69□□□□□ -0.22
UPF1-205ENST00000598209 MAGOHBQ96A72 148 aaKnown RBP13.69□□□□□ -0.22
UPF1-205ENST00000598209 C19orf43Q9BQ61 176 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms