RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CCNJLQ8IV13 435 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 HID1Q8IV36 788 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 ZBED8Q8IZ13 594 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 OR4L1Q8NH43 312 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■■■■■ 27.5
CHMP2A-204ENST00000597848 TSACCQ96A04 125 aaPredicted RBP21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 CFAP36Q96G28 342 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 FCRL3Q96P31 734 aaPredicted RBP21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 FOXP3Q9BZS1 431 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 ERVMER34-1Q9H9K5 563 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 ZDHHC18Q9NUE0 388 aa21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 MTRF1LQ9UGC7 380 aaKnown RBP21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 ZC3H7BQ9UGR2 993 aaKnown RBP21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 OAS3Q9Y6K5 1087 aaKnown RBP21.92■■□□□ 1.1
CHMP2A-204ENST00000597848 LNP1A1A4G5 178 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 EIF3HO15372 352 aaKnown RBP eCLIP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 MTX2O75431 263 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 USP1O94782 785 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 CER1O95813 267 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 PRSS56P0CW18 603 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 CA5AP35218 305 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 ARRB1P49407 418 aaPredicted RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 CDKN1CP49918 316 aaPredicted RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 TUBB4BP68371 445 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 CUL1Q13616 776 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 SMAD1Q15797 465 aaKnown RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 AASDHQ4L235 1098 aaPredicted RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 FASTKD1Q53R41 847 aaKnown RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 LDLRAP1Q5SW96 308 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 GPRC6AQ5T6X5 926 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 KIAA0930Q6ICG6 404 aaPredicted RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 PRR23CQ6ZRP0 262 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 MARK2Q7KZI7 788 aaKnown RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 OXR1Q8N573 874 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 OTUD6BQ8N6M0 293 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 FBXO36Q8NEA4 188 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 OR2I1PQ8NGU4 316 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 TTC25Q96NG3 672 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 ELF4Q99607 663 aaPredicted RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 FAM129AQ9BZQ8 928 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 TRIM39Q9HCM9 518 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 FGF22Q9HCT0 170 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 MRPL40Q9NQ50 206 aaKnown RBP21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 SMOXQ9NWM0 555 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 TEX264Q9Y6I9 313 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 PI4KAP42356 2102 aa21.91■■□□□ 1.1
CHMP2A-204ENST00000597848 E7ESA3 106 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 TNFRSF10CO14798 259 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 DFNA5O60443 496 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 FOXD2O60548 495 aaPredicted RBP21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 TTC4O95801 387 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 CEACAM5P06731 702 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 TGM1P22735 817 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 AKT1P31749 480 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 FOXN2P32314 431 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 CARSP49589 748 aaKnown RBP21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 ZNF423Q2M1K9 1284 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 ALG11Q2TAA5 492 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 PSAPL1Q6NUJ1 521 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 SERPINA9Q86WD7 417 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 NXPE1Q8N323 547 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 MINDY1Q8N5J2 469 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 GPR161Q8N6U8 529 aaKnown RBP21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 PYROXD1Q8WU10 500 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 OR1E3Q8WZA6 343 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 OR2AG1Q9H205 316 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 IL21RQ9HBE5 538 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 CYP4F12Q9HCS2 524 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 CATSPERZQ9NTU4 200 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 ATXN10Q9UBB4 475 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 SLC17A4Q9Y2C5 497 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 FAM169AQ9Y6X4 670 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 SCN8AQ9UQD0 1980 aa21.9■■□□□ 1.1
CHMP2A-204ENST00000597848 ZCWPW2A0A1B0GU75 182 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 PRSS38A1L453 326 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 SCAMP1O15126 338 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 CD3EAPO15446 510 aaKnown RBP21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 RASGRP1O95267 797 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 TNFP01375 233 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 JUNDP17535 347 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 MSH3P20585 1137 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 BLKP51451 505 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 GTF2H3Q13889 308 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 FASTKD3Q14CZ7 662 aaKnown RBP21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 LONRF1Q17RB8 773 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 SPANXN3Q5MJ09 141 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 ADGRG6Q86SQ4 1221 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 PIANPQ8IYJ0 282 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 PHACTR4Q8IZ21 702 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 DDHD1Q8NEL9 900 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 DCUN1D1Q96GG9 259 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 TTC1Q99614 292 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 COPS8Q99627 209 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 EDEM2Q9BV94 578 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 SLC13A1Q9BZW2 595 aa21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 CARS2Q9HA77 564 aaKnown RBP21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 C20orf96Q9NUD7 363 aaPredicted RBP21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.89■■□□□ 1.09
CHMP2A-204ENST00000597848 OTOGLQ3ZCN5 2332 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms