RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SCN8AQ9UQD0 1980 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 KCNN4O15554 427 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 NUAK1O60285 661 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 DNAJC6O75061 913 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 SLC25A14O95258 325 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ATP1A1P05023 1023 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 AK4P27144 223 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 RBMS1P29558 406 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 CCKBRP32239 447 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 PCBP4P57723 403 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ANKRD20A2Q5SQ80 823 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ANKRD20A1Q5TYW2 823 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ANKRD20A3Q5VUR7 823 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 GLT6D1Q7Z4J2 308 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ARL14Q8N4G2 192 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 PTCD2Q8WV60 388 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ATXN7L3BQ96GX2 97 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 HES6Q96HZ4 224 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 HERPUD2Q9BSE4 406 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ZCCHC2Q9C0B9 1178 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 TRIM10Q9UDY6 481 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 FEZ2Q9UHY8 353 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 RABGEF1Q9UJ41 708 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 PKP3Q9Y446 797 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 SPO11Q9Y5K1 396 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ADGRG1Q9Y653 693 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 ASXL3Q9C0F0 2248 aa17.57■□□□□ 0.4
SHKBP1-204ENST00000594862 RP1P56715 2156 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 GRID2O43424 1007 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 VEGFDO43915 354 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 ECEL1O95672 775 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 FTCDO95954 541 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 MPOP05164 745 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 BPIP17213 487 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 SPAM1P38567 509 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 CLCNKAP51800 687 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 INHBCP55103 352 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 CCL7P80098 99 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 PDE1BQ01064 536 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 ITGA9Q13797 1035 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 C3orf38Q5JPI3 329 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 SEL1L2Q5TEA6 688 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 SLC25A41Q8N5S1 370 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 BRSK1Q8TDC3 778 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 DPYSL5Q9BPU6 564 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 C19orf43Q9BQ61 176 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 FRMD8P1Q9BZ68 369 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 SATB2Q9UPW6 733 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 OAS3Q9Y6K5 1087 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 CAPN6Q9Y6Q1 641 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 APC2O95996 2303 aa17.56■□□□□ 0.4
SHKBP1-204ENST00000594862 A0A1W2PQM1 296 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 OR5K4A6NMS3 321 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 CPNE6O95741 557 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 CCDC175P0C221 793 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 EIF2S3P41091 472 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 FASLGP48023 281 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 PDX1P52945 283 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 MAZP56270 477 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 GTF2H3Q13889 308 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 P3H1Q32P28 736 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 MAP9Q49MG5 647 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 CHST15Q7LFX5 561 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 NAGSQ8N159 534 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 TTC30BQ8N4P2 665 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 Q8N9G6 341 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 ZNF248Q8NDW4 579 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 BLOC1S5Q8TDH9 187 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 SH3KBP1Q96B97 665 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 CCDC97Q96F63 343 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 ALS2CR12Q96Q35 445 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 AKAP7Q9P0M2 348 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 ATXN10Q9UBB4 475 aa17.55■□□□□ 0.4
SHKBP1-204ENST00000594862 ZFC3H1O60293 1989 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 KIR2DS5A0A0G2JLQ3 304 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 A0A0G2JNG1 304 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 C5orf60A6NFR6 353 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 C2orf81A6NN90 581 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 KIR2DS3K7RE56 304 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 CHUKO15111 745 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 KMOO15229 486 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 DDX3YO15523 660 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 ACP5P13686 325 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 VCLP18206 1134 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 PSMB4P28070 264 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 CHRNA4P43681 627 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 ABCG1P45844 678 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 GPLD1P80108 840 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 B4GALNT1Q00973 533 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 KLF1Q13351 362 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 KIR2DS5Q14953 304 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 ZNF662Q6ZS27 426 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 ARHGEF18Q6ZSZ5 1173 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 LRRTM4Q86VH4 590 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 DCBLD2Q96PD2 775 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 TIMM29Q9BSF4 260 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 FICDQ9BVA6 458 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 OR2AG1Q9H205 316 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 EPB41L5Q9HCM4 733 aa17.54■□□□□ 0.4
SHKBP1-204ENST00000594862 IL17CQ9P0M4 197 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms