RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 ZNF8P17098 575 aaPredicted RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 TPH1P17752 444 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 RPIAP49247 311 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 LMAN1P49257 510 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 CTBSQ01459 385 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 ITGA9Q13797 1035 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 SMAD1Q15797 465 aaKnown RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 CYP1B1Q16678 543 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 KHDC1Q4VXA5 237 aaKnown RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 TTC27Q6P3X3 843 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 SLC30A9Q6PML9 568 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 C4orf22Q6V702 233 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 EFL1Q7Z2Z2 1120 aaKnown RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 ADGRG6Q86SQ4 1221 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 GPR156Q8NFN8 814 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 OR52K1Q8NGK4 314 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 OR13C4Q8NGS5 318 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 MAGOHBQ96A72 148 aaKnown RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 C19orf43Q9BQ61 176 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 OR2AG1Q9H205 316 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 TAAR2Q9P1P5 351 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 GULP1Q9UBP9 304 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 ZNHIT2Q9UHR6 403 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 FKBPLQ9UIM3 349 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 PRKAB1Q9Y478 270 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 PLEKHM1Q9Y4G2 1056 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 NEUROG3Q9Y4Z2 214 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 PLXNB3Q9ULL4 1909 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 CPED1A4D0V7 1026 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 B4DGG1 531 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 NUAK1O60285 661 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 MTX2O75431 263 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 APRTP07741 180 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 TCP1P17987 556 aaKnown RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 BASP1P80723 227 aaKnown RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 CDH17Q12864 832 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 LRP8Q14114 963 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 SEPT6Q14141 434 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 OGFOD3Q6PK18 319 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 PPP1R21Q6ZMI0 780 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 TMPRSS7Q7RTY8 843 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 GALNT15Q8N3T1 639 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 NAT6Q93015 286 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 DPEP2Q9H4A9 486 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 KCND1Q9NSA2 647 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 SPATS2LQ9NUQ6 558 aaKnown RBP14.41□□□□□ -0.1
VRK3-206ENST00000594090 SMOXQ9NWM0 555 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 APPL1Q9UKG1 709 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 PADI4Q9UM07 663 aa14.41□□□□□ -0.1
VRK3-206ENST00000594090 FAM221BA6H8Z2 402 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 CHUKO15111 745 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 GRID2O43424 1007 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 VEGFDO43915 354 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 NOBOXO60393 691 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A9O60656 530 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 SRP72O76094 671 aaKnown RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A6P19224 532 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A1P22309 533 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A4P22310 534 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 CA5AP35218 305 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A3P35503 534 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A5P35504 534 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 COILP38432 576 aaPredicted RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 HADHAP40939 763 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 ACTR1BP42025 376 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 GRIA1P42261 906 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 CLDN6P56747 220 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 ACTR1AP61163 376 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 TMPRSS15P98073 1019 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 E2F1Q01094 437 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 INSM1Q01101 510 aaPredicted RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 POU6F1Q14863 301 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 PERM1Q5SV97 790 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 HES3Q5TGS1 186 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 PAPD7Q5XG87 772 aaKnown RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 CHST15Q7LFX5 561 aaPredicted RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 SFTPA2Q8IWL1 248 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 DNAAF3Q8N9W5 541 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 DDHD1Q8NEL9 900 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 GDAP1Q8TB36 358 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 DNAJC1Q96KC8 554 aaKnown RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 NAPGQ99747 312 aaPredicted RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A7Q9HAW7 530 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A10Q9HAW8 530 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 UGT1A8Q9HAW9 530 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 CASS4Q9NQ75 786 aa14.4□□□□□ -0.1
VRK3-206ENST00000594090 EIF2B3Q9NR50 452 aaKnown RBP14.4□□□□□ -0.1
VRK3-206ENST00000594090 ZFC3H1O60293 1989 aaKnown RBP14.39□□□□□ -0.11
VRK3-206ENST00000594090 GOLGA6L10A0A0M3HER8 536 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 PHF2O75151 1096 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 GAS8O95995 478 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 ACP5P13686 325 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 XIAPP98170 497 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 TMEM115Q12893 351 aaPredicted RBP14.39□□□□□ -0.11
VRK3-206ENST00000594090 NFATC2Q13469 925 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 PEX6Q13608 980 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 HLTFQ14527 1009 aaKnown RBP eCLIP14.39□□□□□ -0.11
VRK3-206ENST00000594090 KCTD19Q17RG1 926 aaPredicted RBP14.39□□□□□ -0.11
VRK3-206ENST00000594090 C14orf28Q4W4Y0 310 aa14.39□□□□□ -0.11
VRK3-206ENST00000594090 LDLRAP1Q5SW96 308 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms