RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 GYPCP04921 128 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 F3P13726 295 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 CD86P42081 329 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 EPHA4P54764 986 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 MC2RQ01718 297 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 SNAP47Q5SQN1 464 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 CCNYQ8ND76 341 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 RTP4Q96DX8 246 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 ADGRE3Q9BY15 652 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 TRIM4Q9C037 500 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 CARD9Q9H257 536 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 HECTD1Q9ULT8 2610 aa23.67■■□□□ 1.38
LSM4-202ENST00000593564 KIR2DS5A0A0G2JLQ3 304 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 A0A0G2JNG1 304 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 KIR2DS3K7RE56 304 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 CAPN5O15484 640 aaPredicted RBP23.66■■□□□ 1.38
LSM4-202ENST00000593564 NUAK1O60285 661 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 JCHAINP01591 159 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 MAN1A1P33908 653 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 IFI35P80217 286 aaPredicted RBP23.66■■□□□ 1.38
LSM4-202ENST00000593564 KIR2DS5Q14953 304 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 AVL9Q8NBF6 648 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 NCSTNQ92542 709 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 ZNF830Q96NB3 372 aaPredicted RBP23.66■■□□□ 1.38
LSM4-202ENST00000593564 ZPBPQ9BS86 351 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.66■■□□□ 1.38
LSM4-202ENST00000593564 SPRY4Q9C004 299 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 EPB41L1Q9H4G0 881 aa23.66■■□□□ 1.38
LSM4-202ENST00000593564 UBR5O95071 2799 aaPredicted RBP23.66■■□□□ 1.38
LSM4-202ENST00000593564 OR5K4A6NMS3 321 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 ZNF891A8MT65 544 aaPredicted RBP23.65■■□□□ 1.38
LSM4-202ENST00000593564 A8MU76 341 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 KCNK1O00180 336 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 GRID2O43424 1007 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 SNX2O60749 519 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 H2AFZP0C0S5 128 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 CLCNKAP51800 687 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 PPIDQ08752 370 aaKnown RBP23.65■■□□□ 1.38
LSM4-202ENST00000593564 CEACAM20Q6UY09 585 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 H2AFVQ71UI9 128 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 PHYKPLQ8IUZ5 450 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 CNTD1Q8N815 330 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 CTNNBL1Q8WYA6 563 aaPredicted RBP23.65■■□□□ 1.38
LSM4-202ENST00000593564 RAPGEF5Q92565 580 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 EID2BQ96D98 161 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 RNF157Q96PX1 679 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 FBXO8Q9NRD0 319 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 ATXN10Q9UBB4 475 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 CPNE7Q9UBL6 633 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 ADGRG1Q9Y653 693 aa23.65■■□□□ 1.38
LSM4-202ENST00000593564 KDELR1P24390 212 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 MAP4P27816 1152 aaKnown RBP23.64■■□□□ 1.37
LSM4-202ENST00000593564 HNRNPH3P31942 346 aaKnown RBP23.64■■□□□ 1.37
LSM4-202ENST00000593564 ZBTB17Q13105 803 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 NLGN4XQ8N0W4 816 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 NLGN4YQ8NFZ3 816 aaPredicted RBP23.64■■□□□ 1.37
LSM4-202ENST00000593564 COL26A1Q96A83 441 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 SLC45A3Q96JT2 553 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 CATSPER2Q96P56 530 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 ZFYVE1Q9HBF4 777 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 MAST4O15021 2626 aa23.64■■□□□ 1.37
LSM4-202ENST00000593564 LILRA5A6NI73 299 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 ZNF487B1APH4 448 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 GPR89AB7ZAQ6 455 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 GPR89BP0CG08 455 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 ZNF8P17098 575 aaPredicted RBP23.63■■□□□ 1.37
LSM4-202ENST00000593564 GALNT3Q14435 633 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 ZNF569Q5MCW4 686 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 ZFYVE27Q5T4F4 411 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 PLD5Q8N7P1 536 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 TRIB3Q96RU7 358 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 CTRCQ99895 268 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 ZSCAN5AQ9BUG6 496 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 PACSIN1Q9BY11 444 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 OR2AG1Q9H205 316 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 PRDM8Q9NQV8 689 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 NFKBIL1Q9UBC1 381 aaPredicted RBP23.63■■□□□ 1.37
LSM4-202ENST00000593564 TUBD1Q9UJT1 453 aa23.63■■□□□ 1.37
LSM4-202ENST00000593564 MN1Q10571 1320 aaPredicted RBP23.62■■□□□ 1.37
LSM4-202ENST00000593564 SYCE3A1L190 88 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 ARHGAP6O43182 974 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 CASP14P31944 242 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 MAPK9P45984 424 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 POLE2P56282 527 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 DCDC1P59894 354 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 UBE2IP63279 158 aaKnown RBP23.62■■□□□ 1.37
LSM4-202ENST00000593564 KCNAB2Q13303 367 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 SLC18A3Q16572 532 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 KIAA1143Q96AT1 154 aaPredicted RBP23.62■■□□□ 1.37
LSM4-202ENST00000593564 EFHD1Q9BUP0 239 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 SPATA16Q9BXB7 569 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 TBC1D10AQ9BXI6 508 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 GPN2Q9H9Y4 310 aaPredicted RBP23.62■■□□□ 1.37
LSM4-202ENST00000593564 UCK1Q9HA47 277 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 TRIM39Q9HCM9 518 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 ARFGAP3Q9NP61 516 aa23.62■■□□□ 1.37
LSM4-202ENST00000593564 TMEM184BQ9Y519 407 aaPredicted RBP23.62■■□□□ 1.37
LSM4-202ENST00000593564 SLC25A14O95258 325 aaPredicted RBP23.61■■□□□ 1.37
LSM4-202ENST00000593564 ANKRD34CP0C6C1 535 aa23.61■■□□□ 1.37
LSM4-202ENST00000593564 CCR10P46092 362 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms