RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GEMIN8Q9NWZ8 242 aaKnown RBP13.1□□□□□ -0.31
H3F3B-213ENST00000593254 PKD2L2Q9NZM6 624 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 VPS18Q9P253 973 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 CNOT6Q9ULM6 557 aaKnown RBP13.1□□□□□ -0.31
H3F3B-213ENST00000593254 TMEM98Q9Y2Y6 226 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 ALG6Q9Y672 507 aa13.1□□□□□ -0.31
H3F3B-213ENST00000593254 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-213ENST00000593254 RGSL1A5PLK6 1076 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 INPP4BO15327 924 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 ECEL1O95672 775 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 ACTR1BP42025 376 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 NOP2P46087 812 aaKnown RBP13.09□□□□□ -0.31
H3F3B-213ENST00000593254 NR2C2P49116 596 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 ACTR1AP61163 376 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 ZFP36L1Q07352 338 aaKnown RBP13.09□□□□□ -0.31
H3F3B-213ENST00000593254 PEX6Q13608 980 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 LRP8Q14114 963 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 GALNT3Q14435 633 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 TEX44Q53QW1 395 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 BZW1Q7L1Q6 419 aaKnown RBP13.09□□□□□ -0.31
H3F3B-213ENST00000593254 LYSMD3Q7Z3D4 306 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 SLITRK4Q8IW52 837 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 RP1L1Q8IWN7 2480 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-213ENST00000593254 PATE1Q8WXA2 126 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 HTR3CQ8WXA8 447 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 EID2BQ96D98 161 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 FAM83DQ9H4H8 585 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 EPB41L5Q9HCM4 733 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 SEPT10Q9P0V9 454 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 SAE1Q9UBE0 346 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-213ENST00000593254 PLEKHM1Q9Y4G2 1056 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
H3F3B-213ENST00000593254 OAS3Q9Y6K5 1087 aaKnown RBP13.09□□□□□ -0.31
H3F3B-213ENST00000593254 FADS2P1A8MWK0 482 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 B4GAT1O43505 415 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 CST8O60676 142 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 DNAJC6O75061 913 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 MT-CYBP00156 380 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 HGFP14210 728 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 WT1P19544 449 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 PTPN3P26045 913 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 CDK18Q07002 472 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 ADCY2Q08462 1091 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 CLCA4Q14CN2 919 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 SPA17Q15506 151 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 TFDP3Q5H9I0 405 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 C11orf63Q6NUN7 778 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 B4GALNT4Q76KP1 1039 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 MARK2Q7KZI7 788 aaKnown RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 TMPRSS9Q7Z410 1059 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 KDELC2Q7Z4H8 507 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 JAMLQ86YT9 394 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 SPATA22Q8NHS9 363 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 TFB1MQ8WVM0 346 aaKnown RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 MRFAP1L1Q96HT8 127 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 TEKT5Q96M29 485 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 ZFYVE1Q9HBF4 777 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 GLOD4Q9HC38 313 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 MAGEE1Q9HCI5 957 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 WDR70Q9NW82 654 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 NFKBIL1Q9UBC1 381 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 TFR2Q9UP52 801 aa13.08□□□□□ -0.32
H3F3B-213ENST00000593254 PCYT1BQ9Y5K3 369 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-213ENST00000593254 SDK2Q58EX2 2172 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 hCG_1818297A0A087WSY0 165 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 RHPN2P1A8MT19 583 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 PPM1DO15297 605 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.321e-10■■■□□ 16.9
H3F3B-213ENST00000593254 ASMTLO95671 621 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 CPNE6O95741 557 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 PIRTP0C851 137 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 FECHP22830 423 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 CD68P34810 354 aaPredicted RBP13.07□□□□□ -0.32
H3F3B-213ENST00000593254 CYLC1P35663 651 aaPredicted RBP13.07□□□□□ -0.32
H3F3B-213ENST00000593254 GPR3P46089 330 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 OR1D5P58170 312 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 DCDC1P59894 354 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 WASHC5Q12768 1159 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 PCSK7Q16549 785 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 MANEAQ5SRI9 462 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 KAZNQ674X7 775 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 TMC3Q7Z5M5 1100 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 VASH2Q86V25 355 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 DTX1Q86Y01 620 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 PSMG3-AS1Q96PY0 264 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 PANX2Q96RD6 677 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 EPN3Q9H201 632 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 LUC7LQ9NQ29 371 aaKnown RBP13.07□□□□□ -0.32
H3F3B-213ENST00000593254 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 ZNF711Q9Y462 761 aa13.07□□□□□ -0.32
H3F3B-213ENST00000593254 ZW10O43264 779 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 MTSS1O43312 755 aa13.06□□□□□ -0.32
H3F3B-213ENST00000593254 NDST3O95803 873 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms