RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 SLC4A1P02730 911 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 LIFP15018 202 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 ITGB6P18564 788 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 HNRNPH3P31942 346 aaKnown RBP20.25■□□□□ 0.83
TRIM47-207ENST00000593089 TSPAN7P41732 249 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 RAB15P59190 212 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 IFI35P80217 286 aaPredicted RBP20.25■□□□□ 0.83
TRIM47-207ENST00000593089 ZNF648Q5T619 568 aaPredicted RBP20.25■□□□□ 0.83
TRIM47-207ENST00000593089 ALS2CLQ60I27 953 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 SLC9B2Q86UD5 537 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.25■□□□□ 0.83
TRIM47-207ENST00000593089 SH3KBP1Q96B97 665 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 EID2BQ96D98 161 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 CTRCQ99895 268 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 HERPUD2Q9BSE4 406 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 SPATA16Q9BXB7 569 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 SLC12A9Q9BXP2 914 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 TRIM4Q9C037 500 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 XPO4Q9C0E2 1151 aaKnown RBP20.25■□□□□ 0.83
TRIM47-207ENST00000593089 CARD9Q9H257 536 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 DEF6Q9H4E7 631 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 CLMPQ9H6B4 373 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 ZFYVE1Q9HBF4 777 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 STARD5Q9NSY2 213 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 PDP2Q9P2J9 529 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 ATXN10Q9UBB4 475 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 SHOC2Q9UQ13 582 aa20.25■□□□□ 0.83
TRIM47-207ENST00000593089 RGSL1A5PLK6 1076 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 A6NCN8 305 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 NUAK1O60285 661 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 RAD1O60671 282 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 TMEM253P0C7T8 217 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 PIRTP0C851 137 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 F3P13726 295 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 SLC2A4P14672 509 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 ZNF8P17098 575 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-207ENST00000593089 CLCA4Q14CN2 919 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 PCSK7Q16549 785 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 ZNF569Q5MCW4 686 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 WDR74Q6RFH5 385 aaPredicted RBP20.24■□□□□ 0.83
TRIM47-207ENST00000593089 BMPERQ8N8U9 685 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 BRD8Q9H0E9 1235 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 OR2AG1Q9H205 316 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 KLHL3Q9UH77 587 aa20.24■□□□□ 0.83
TRIM47-207ENST00000593089 FLNBO75369 2602 aaKnown RBP20.23■□□□□ 0.83
TRIM47-207ENST00000593089 ASH1LQ9NR48 2969 aaKnown RBP20.23■□□□□ 0.83
TRIM47-207ENST00000593089 WISP1O95388 367 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 TPM3P06753 285 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 SFTPCP11686 197 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 KCNC4Q03721 635 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 ASTE1Q2TB18 679 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-207ENST00000593089 SLC9A4Q6AI14 798 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 NPNTQ6UXI9 565 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 ARHGAP22Q7Z5H3 698 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 PHYKPLQ8IUZ5 450 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 GPR26Q8NDV2 337 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 SLC35G2Q8TBE7 412 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 RTP4Q96DX8 246 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 AGAP3Q96P47 875 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 TRIB3Q96RU7 358 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 TBC1D10AQ9BXI6 508 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 MAK16Q9BXY0 300 aaKnown RBP20.23■□□□□ 0.83
TRIM47-207ENST00000593089 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.23■□□□□ 0.83
TRIM47-207ENST00000593089 OSGEPL1Q9H4B0 414 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 PRDM8Q9NQV8 689 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 KLC4Q9NSK0 619 aa20.23■□□□□ 0.83
TRIM47-207ENST00000593089 KIR2DS5A0A0G2JLQ3 304 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 A0A0G2JNG1 304 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 KIR2DS3K7RE56 304 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 APOL1O14791 398 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 AKR1B10O60218 316 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 SLC25A14O95258 325 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-207ENST00000593089 EPHA4P54764 986 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 MC2RQ01718 297 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 KIR2DS5Q14953 304 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 PLA2G4EQ3MJ16 856 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 CRTC3Q6UUV7 619 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 B4GALNT4Q76KP1 1039 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 NT5DC3Q86UY8 548 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 OR8K1Q8NGG5 319 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 IMP4Q96G21 291 aaKnown RBP20.22■□□□□ 0.83
TRIM47-207ENST00000593089 TEFMQ96QE5 360 aaKnown RBP20.22■□□□□ 0.83
TRIM47-207ENST00000593089 CPNE7Q9UBL6 633 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 PILRAQ9UKJ1 303 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 ZNF711Q9Y462 761 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 ADGRG1Q9Y653 693 aa20.22■□□□□ 0.83
TRIM47-207ENST00000593089 C3orf70A6NLC5 250 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-207ENST00000593089 OR5K4A6NMS3 321 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 PPFIA2O75334 1257 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 KRT1P04264 644 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 PDK1Q15118 436 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 BORAQ6PGQ7 559 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 ADGRG6Q86SQ4 1221 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 RFX6Q8HWS3 928 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 RNF25Q96BH1 459 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-207ENST00000593089 DNAJC7Q99615 494 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 ZSCAN5AQ9BUG6 496 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 GPR63Q9BZJ6 419 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 MAGEE1Q9HCI5 957 aa20.21■□□□□ 0.83
TRIM47-207ENST00000593089 TRIM39Q9HCM9 518 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms