RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 EME2A4GXA9 379 aaPredicted RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 GAPDHSO14556 408 aaPredicted RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 ZNF185O15231 689 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 LDB2O43679 373 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 VEGFDO43915 354 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 NUAK1O60285 661 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 DNAJC6O75061 913 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 PHF2O75151 1096 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 PRAMEF1O95521 474 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 COILP38432 576 aaPredicted RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 FNTAP49354 379 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 BASP1P80723 227 aaKnown RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 CDK16Q00536 496 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 CTBSQ01459 385 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 LAMB3Q13751 1172 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 POU6F1Q14863 301 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 CHRNA6Q15825 494 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 CCDC157Q569K6 752 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 TTC27Q6P3X3 843 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 CCDC137Q6PK04 289 aaKnown RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 PPP1R21Q6ZMI0 780 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 MARK2Q7KZI7 788 aaKnown RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 SLC35F3Q8IY50 421 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 GALNT15Q8N3T1 639 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 DNAAF3Q8N9W5 541 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 FAM46DQ8NEK8 389 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 OR52K1Q8NGK4 314 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 CCL4L1Q8NHW4 92 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 NAT6Q93015 286 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 ZCCHC2Q9C0B9 1178 aaKnown RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 OR2AG1Q9H205 316 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 SUDS3Q9H7L9 328 aaPredicted RBP11.78□□□□□ -0.52
LIG3-213ENST00000590630 ATXN10Q9UBB4 475 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 ZNHIT2Q9UHR6 403 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 GPSM3Q9Y4H4 160 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
LIG3-213ENST00000590630 PIKFYVEQ9Y2I7 2098 aa11.77□□□□□ -0.52
LIG3-213ENST00000590630 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.77□□□□□ -0.53
LIG3-213ENST00000590630 MROH6A6NGR9 719 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 AP3B1O00203 1094 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 CHUKO15111 745 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 GRID2O43424 1007 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 HYAL3O43820 417 aaPredicted RBP11.77□□□□□ -0.53
LIG3-213ENST00000590630 SRP72O76094 671 aaKnown RBP11.77□□□□□ -0.53
LIG3-213ENST00000590630 TPH1P17752 444 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 E2F1Q01094 437 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 NFATC2Q13469 925 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 PTPRCAPQ14761 206 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 SMAD1Q15797 465 aaKnown RBP11.77□□□□□ -0.53
LIG3-213ENST00000590630 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 OGFOD3Q6PK18 319 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 DHRS13Q6UX07 377 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 ADGRG6Q86SQ4 1221 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 NRROSQ86YC3 692 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 CHCHD4Q8N4Q1 142 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 KYQ8NBH2 561 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 DDHD1Q8NEL9 900 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 OR6C4Q8NGE1 309 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 OR13C4Q8NGS5 318 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 GDAP1Q8TB36 358 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 GRK7Q8WTQ7 553 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 SCNM1Q9BWG6 230 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 DPEP2Q9H4A9 486 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 CASS4Q9NQ75 786 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 NLE1Q9NVX2 485 aaPredicted RBP11.77□□□□□ -0.53
LIG3-213ENST00000590630 PIH1D1Q9NWS0 290 aaKnown RBP11.77□□□□□ -0.53
LIG3-213ENST00000590630 SMARCAL1Q9NZC9 954 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 TAAR2Q9P1P5 351 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 SIRPGQ9P1W8 387 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 FKBPLQ9UIM3 349 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 TMPRSS11EQ9UL52 423 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 PADI4Q9UM07 663 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 NEUROG3Q9Y4Z2 214 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 KCTD3Q9Y597 815 aa11.77□□□□□ -0.53
LIG3-213ENST00000590630 HEATR9A2RTY3 570 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 FAM221BA6H8Z2 402 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 AGAP14A8MT82 685 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 H7C0S8 307 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 CDK14O94921 469 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 MYF5P13349 255 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 ZNF8P17098 575 aaPredicted RBP11.76□□□□□ -0.53
LIG3-213ENST00000590630 TPSB2P20231 275 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 PSMA3P25788 255 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 AK4P27144 223 aaPredicted RBP11.76□□□□□ -0.53
LIG3-213ENST00000590630 ACTR1BP42025 376 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 ACTR1AP61163 376 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 XIAPP98170 497 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 TMEM115Q12893 351 aaPredicted RBP11.76□□□□□ -0.53
LIG3-213ENST00000590630 GPS1Q13098 491 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 SEPT6Q14141 434 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 TPSAB1Q15661 275 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 SKIDA1Q1XH10 827 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 GUSBP11Q6P575 273 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 SLC30A9Q6PML9 568 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 CHST15Q7LFX5 561 aaPredicted RBP11.76□□□□□ -0.53
LIG3-213ENST00000590630 TMPRSS7Q7RTY8 843 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 TMPRSS12Q86WS5 348 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 GPR156Q8NFN8 814 aa11.76□□□□□ -0.53
LIG3-213ENST00000590630 IFI44Q8TCB0 444 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms