RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 BDH2Q9BUT1 245 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 LIN28AQ9H9Z2 209 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 IL1RL2Q9HB29 575 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 NLE1Q9NVX2 485 aaPredicted RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 TAS2R13Q9NYV9 303 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 GMIPQ9P107 970 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 KCTD3Q9Y597 815 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 PTGDR2Q9Y5Y4 395 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 MYO16Q9Y6X6 1858 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 TRPM7Q96QT4 1865 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 ARNTLO00327 626 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 INPP4BO15327 924 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 PRAMEF11O60813 436 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SLC22A3O75751 556 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SOAT2O75908 522 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 NDST3O95803 873 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 CHRNA1P02708 482 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SLC4A1P02730 911 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 LINC00032P0C843 101 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 CDH1P12830 882 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 UGT1A6P19224 532 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 BEX3Q00994 111 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 RAD51Q06609 339 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 TUBA3CQ13748 450 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SEMA3AQ14563 771 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 RAB39AQ14964 217 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 ZNF829Q3KNS6 432 aaPredicted RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SETMARQ53H47 684 aaPredicted RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 ALFQ53S48 1182 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 RIMKLAQ8IXN7 391 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 AADATQ8N5Z0 425 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 VPS50Q96JG6 964 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 TRIB3Q96RU7 358 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 HEBP1Q9NRV9 189 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 OLA1Q9NTK5 396 aaKnown RBP12.3□□□□□ -0.44
PDE4A-207ENST00000590407 RIC8BQ9NVN3 520 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 MAGEL2Q9UJ55 1249 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 RNF112Q9ULX5 631 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 MED16Q9Y2X0 877 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 PCDHB3Q9Y5E6 796 aa12.3□□□□□ -0.44
PDE4A-207ENST00000590407 SCN10AQ9Y5Y9 1956 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 A0A0U1RQF3 1178 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 FAM149AA5PLN7 773 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 IQCA1LA6NCM1 817 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 LRRC14BA6NHZ5 514 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 CCDC154A6NI56 674 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 SUPT3HB4E1H0 165 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 H3BMQ9 156 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 CCL22O00626 93 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 SNX2O60749 519 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 RAMP2O60895 175 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 CBFA2T3O75081 653 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 SUPT3HO75486 399 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 ECI2O75521 394 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 CNTN5O94779 1100 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 HPRP00739 348 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 IGLV3-27P01718 113 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 INHBBP09529 407 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 ENTPD1P49961 510 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 ZNF140P52738 457 aaPredicted RBP12.29□□□□□ -0.44
PDE4A-207ENST00000590407 TMBIM6P55061 237 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 DIO3P55073 304 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 SPIDRQ14159 915 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 POLD3Q15054 466 aaPredicted RBP12.29□□□□□ -0.44
PDE4A-207ENST00000590407 FAM117BQ6P1L5 589 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 ELMSAN1Q6PJG2 1045 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 ZNF773Q6PK81 442 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 AFTPHQ6ULP2 937 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 SERINC5Q86VE9 423 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 HID1Q8IV36 788 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 PDPRQ8NCN5 879 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 CYGBQ8WWM9 190 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 EXT2Q93063 718 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
PDE4A-207ENST00000590407 COG8Q96MW5 612 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 KCNA7Q96RP8 456 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 SLC30A3Q99726 388 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 SEMA3CQ99985 751 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
PDE4A-207ENST00000590407 LRRC3Q9BY71 257 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 PDFQ9HBH1 243 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 GIMAP2Q9UG22 337 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 PCTPQ9UKL6 214 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 CDC14AQ9UNH5 594 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 ZNF510Q9Y2H8 683 aa12.29□□□□□ -0.44
PDE4A-207ENST00000590407 GBF1Q92538 1859 aa12.28□□□□□ -0.44
PDE4A-207ENST00000590407 TDRD15B5MCY1 1934 aaKnown RBP12.28□□□□□ -0.44
PDE4A-207ENST00000590407 CRCPO75575 148 aa12.28□□□□□ -0.44
PDE4A-207ENST00000590407 RHOBTB1O94844 696 aa12.28□□□□□ -0.44
PDE4A-207ENST00000590407 ATE1O95260 518 aa12.28□□□□□ -0.44
PDE4A-207ENST00000590407 ZNF12P17014 697 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms