RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 MAGEE1Q9HCI5 957 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 BRD7Q9NPI1 651 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 NCKIPSDQ9NZQ3 722 aa10.33□□□□□ -0.76
SDF2-208ENST00000589788 PNMA8BQ9ULN7 279 aaPredicted RBP10.33□□□□□ -0.76
SDF2-208ENST00000589788 LRP4O75096 1905 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 GOLGA4Q13439 2230 aaKnown RBP10.32□□□□□ -0.76
SDF2-208ENST00000589788 TMEM202A6NGA9 273 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 LMO7DNF2Z398 122 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 LCE2BO14633 110 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 TPP1O14773 563 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 GCATO75600 419 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 RFPL3O75679 317 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 TOP3BO95985 862 aaKnown RBP10.32□□□□□ -0.76
SDF2-208ENST00000589788 CDK4P11802 303 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 SPINK2P20155 84 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 TEAD1P28347 426 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 SPINT3P49223 89 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 ACADVLP49748 655 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 DUSP3P51452 185 aaPredicted RBP10.32□□□□□ -0.76
SDF2-208ENST00000589788 GEMP55040 296 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 CDK3Q00526 305 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 TCEA2Q15560 299 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 ANKRD20A2Q5SQ80 823 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 MEI1Q5TIA1 1274 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 ANKRD20A1Q5TYW2 823 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 ANKRD20A3Q5VUR7 823 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 ZCCHC8Q6NZY4 707 aaKnown RBP10.32□□□□□ -0.76
SDF2-208ENST00000589788 KDELC1Q6UW63 502 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 GKN2Q86XP6 184 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 SLC25A41Q8N5S1 370 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 FAM181AQ8N9Y4 354 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 OR1E3Q8WZA6 343 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 LRRC45Q96CN5 670 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 PDXPQ96GD0 296 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 HIC2Q96JB3 615 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 APOLD1Q96LR9 279 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 PPP1R2P1Q96PQ5 205 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 WDR24Q96S15 920 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 RIOK2Q9BVS4 552 aaKnown RBP10.32□□□□□ -0.76
SDF2-208ENST00000589788 LGR4Q9BXB1 951 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 TEX101Q9BY14 249 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 GBA3Q9H227 469 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 CYP4F12Q9HCS2 524 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 FGF22Q9HCT0 170 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 RAD18Q9NS91 495 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 FOXD3Q9UJU5 478 aaPredicted RBP10.32□□□□□ -0.76
SDF2-208ENST00000589788 SHOC2Q9UQ13 582 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 ZNF711Q9Y462 761 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 JRKLQ9Y4A0 524 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 NEUROG3Q9Y4Z2 214 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 PCDHGA1Q9Y5H4 931 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 DGKBQ9Y6T7 804 aa10.32□□□□□ -0.76
SDF2-208ENST00000589788 LOC285095A0A1B0GVY8 99 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 PRSS38A1L453 326 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 RGSL1A5PLK6 1076 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 EIF1AYO14602 144 aaKnown RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 EPOP01588 193 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 GIMD1P0DJR0 217 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 CKMT1AP12532 417 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 HLA-DPA1P20036 260 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 ACP1P24666 158 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 KLF1Q13351 362 aaPredicted RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 ILKQ13418 452 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 CDKN3Q16667 212 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 SIRPB2Q5JXA9 342 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 DOK6Q6PKX4 331 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 LVRNQ6Q4G3 990 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 DHRS13Q6UX07 377 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 ADAMTSL4Q6UY14 1074 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 SYT10Q6XYQ8 523 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 ARHGEF18Q6ZSZ5 1173 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 GALNT15Q8N3T1 639 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 SDR16C5Q8N3Y7 309 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 CCDC110Q8TBZ0 833 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 OXNAD1Q96HP4 312 aaPredicted RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 SPATA13Q96N96 652 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 CLPBQ9H078 707 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 CDH19Q9H159 772 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 CARD9Q9H257 536 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 FAM83DQ9H4H8 585 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 SUDS3Q9H7L9 328 aaPredicted RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 CARS2Q9HA77 564 aaKnown RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 USP29Q9HBJ7 922 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 MRPL40Q9NQ50 206 aaKnown RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 KLK13Q9UKR3 277 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 WASF3Q9UPY6 502 aa10.31□□□□□ -0.76
SDF2-208ENST00000589788 R3HDM2Q9Y2K5 976 aaKnown RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 AAR2Q9Y312 384 aaKnown RBP10.31□□□□□ -0.76
SDF2-208ENST00000589788 PTPRBP23467 1997 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 TCRBV7S2A1N4TA0A589 114 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 CTAGE9A4FU28 777 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 FANCGO15287 622 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 INPP4BO15327 924 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 YY2O15391 372 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 ASMTLO95671 621 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 SOD1P00441 154 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 FGF1P05230 155 aa10.3□□□□□ -0.76
SDF2-208ENST00000589788 CELA2BP08218 269 aaPredicted RBP10.3□□□□□ -0.76
SDF2-208ENST00000589788 MYF5P13349 255 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms