RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF165P49910 485 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 EPHB1P54762 984 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 GFERP55789 205 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 MAP7Q14244 749 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 KIR2DS5Q14953 304 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC43-204ENST00000588687 LPCAT1Q8NF37 534 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 LRRN4Q8WUT4 740 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 FAF2Q96CS3 445 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 ABHD17AQ96GS6 310 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 NAP1L5Q96NT1 182 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-204ENST00000588687 BPIFA3Q9BQP9 254 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 PCDH9Q9HC56 1237 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 CPNE7Q9UBL6 633 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 ANAPC7Q9UJX3 599 aa18.21■□□□□ 0.51
CCDC43-204ENST00000588687 MRPS18BQ9Y676 258 aaKnown RBP18.21■□□□□ 0.51
CCDC43-204ENST00000588687 UNC79Q9P2D8 2635 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 C1orf232A0A0U1RR37 186 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 NUAK1O60285 661 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 ZNF28P17035 718 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 CES1P23141 567 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 CLCNKAP51800 687 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 ITKQ08881 620 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 UBAP2LQ14157 1087 aaKnown RBP18.2■□□□□ 0.5
CCDC43-204ENST00000588687 KRT81Q14533 505 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 QPCTQ16769 361 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 ATP13A4Q4VNC1 1196 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 TIGD7Q6NT04 549 aaPredicted RBP18.2■□□□□ 0.5
CCDC43-204ENST00000588687 SLC9B2Q86UD5 537 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 APOBEC4Q8WW27 367 aaKnown RBP18.2■□□□□ 0.5
CCDC43-204ENST00000588687 SH3KBP1Q96B97 665 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 EFHD1Q9BUP0 239 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 NUP85Q9BW27 656 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 CARD9Q9H257 536 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 EPB41L1Q9H4G0 881 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 UCK1Q9HA47 277 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 PRDM8Q9NQV8 689 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 RBM22Q9NW64 420 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■■■■■ 41.1
CCDC43-204ENST00000588687 SCHIP1Q9P0W5 487 aaPredicted RBP18.2■□□□□ 0.5
CCDC43-204ENST00000588687 ATXN10Q9UBB4 475 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 KLHL3Q9UH77 587 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 IP6K2Q9UHH9 426 aa18.2■□□□□ 0.5
CCDC43-204ENST00000588687 POLR1CO15160 346 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-204ENST00000588687 CYP1A2P05177 515 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 ZNF8P17098 575 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-204ENST00000588687 CCNCP24863 283 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 MAN1A1P33908 653 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 MAPK9P45984 424 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 GBE1Q04446 702 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 IFI16Q16666 785 aaKnown RBP18.19■□□□□ 0.5
CCDC43-204ENST00000588687 DEFB109BQ30KR1 87 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 ANO6Q4KMQ2 910 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 FIGNQ5HY92 759 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 CCDC183Q5T5S1 534 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 PQLC3Q8N755 202 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 PLEKHG4BQ96PX9 1271 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 ZNF670Q9BS34 389 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-204ENST00000588687 TRIT1Q9H3H1 467 aaKnown RBP18.19■□□□□ 0.5
CCDC43-204ENST00000588687 FAM83DQ9H4H8 585 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 STN1Q9H668 368 aaKnown RBP18.19■□□□□ 0.5
CCDC43-204ENST00000588687 DTLQ9NZJ0 730 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 NENFQ9UMX5 172 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 TTLL3Q9Y4R7 772 aa18.19■□□□□ 0.5
CCDC43-204ENST00000588687 SPTBN1Q01082 2364 aaKnown RBP18.19■□□□□ 0.5
CCDC43-204ENST00000588687 RGSL1A5PLK6 1076 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 GRID2O43424 1007 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 SNX2O60749 519 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 SLC2A4P14672 509 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 SLC10A2Q12908 348 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-204ENST00000588687 ANKRD20A8PQ5CZ79 823 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 ESX1Q8N693 406 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 HDAC11Q96DB2 347 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 C9orf72Q96LT7 481 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 TRIB3Q96RU7 358 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 NFKBIL1Q9UBC1 381 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-204ENST00000588687 SLC23A2Q9UGH3 650 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 KCNMB2Q9Y691 235 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 SLC30A1Q9Y6M5 507 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 RPS6KL1Q9Y6S9 549 aa18.18■□□□□ 0.5
CCDC43-204ENST00000588687 PRRC2CQ9Y520 2896 aaKnown RBP18.17■□□□□ 0.5
CCDC43-204ENST00000588687 A0A087X0T9 212 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 GOLGA6L3A6NEY3 463 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 OR5K4A6NMS3 321 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 K7EM74 188 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 CHUKO15111 745 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 FURINP09958 794 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 FAM228BP0C875 321 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 CA4P22748 312 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 DCDC1P59894 354 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 ZBTB17Q13105 803 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 LACTB2Q53H82 288 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-204ENST00000588687 ZNF648Q5T619 568 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-204ENST00000588687 PLXDC1Q8IUK5 500 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 PHYKPLQ8IUZ5 450 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 CNTD1Q8N815 330 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 GPR26Q8NDV2 337 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 MIB2Q96AX9 1013 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 RNF31Q96EP0 1072 aa18.17■□□□□ 0.5
CCDC43-204ENST00000588687 BRD8Q9H0E9 1235 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms