RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 KCTD11Q693B1 232 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 DARS2Q6PI48 645 aaKnown RBP10.39□□□□□ -0.75
TPM4-209ENST00000588483 DOK6Q6PKX4 331 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 GLT6D1Q7Z4J2 308 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 PHYKPLQ8IUZ5 450 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 SFTPA2Q8IWL1 248 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 SFRP1Q8N474 314 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 SNIP1Q8TAD8 396 aaKnown RBP10.39□□□□□ -0.75
TPM4-209ENST00000588483 LIN37Q96GY3 246 aaPredicted RBP10.39□□□□□ -0.75
TPM4-209ENST00000588483 SPATA16Q9BXB7 569 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 TRIM39Q9HCM9 518 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 IL26Q9NPH9 171 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 SMOXQ9NWM0 555 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 ATXN10Q9UBB4 475 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 FEZ2Q9UHY8 353 aaPredicted RBP10.39□□□□□ -0.75
TPM4-209ENST00000588483 TMPRSS11EQ9UL52 423 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 GUCA1BQ9UMX6 200 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 R3HDM2Q9Y2K5 976 aaKnown RBP10.39□□□□□ -0.75
TPM4-209ENST00000588483 PCDHGA8Q9Y5G5 932 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 ENTPD2Q9Y5L3 495 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 RNF215Q9Y6U7 377 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 LOC400499M0QZD8 3231 aa10.39□□□□□ -0.75
TPM4-209ENST00000588483 SMG1Q96Q15 3661 aaKnown RBP10.39□□□□□ -0.75
TPM4-209ENST00000588483 A0A1W2PNU3 283 aaPredicted RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 TCRBV7S2A1N4TA0A589 114 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 TMX2-CTNND1H3BSU7 103 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 GAPDHSO14556 408 aaPredicted RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 GRID2O43424 1007 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 VEGFDO43915 354 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 BRINP1O60477 761 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 SLC25A14O95258 325 aaPredicted RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 ECEL1O95672 775 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ATP1A1P05023 1023 aaKnown RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 STIP1P31948 543 aaKnown RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 SPAM1P38567 509 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ACTR1BP42025 376 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ERVPABLB-1P60509 514 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ACTR1AP61163 376 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 CCL7P80098 99 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 B4GALNT1Q00973 533 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ZFP36L1Q07352 338 aaKnown RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 EIF3IQ13347 325 aaKnown RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 SQSTM1Q13501 440 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 PRPSAP1Q14558 356 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 OASLQ15646 514 aaKnown RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 PARP6Q2NL67 630 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 TBC1D25Q3MII6 688 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ATP13A5Q4VNC0 1218 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 SEL1L2Q5TEA6 688 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ALS2CLQ60I27 953 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 DENND5AQ6IQ26 1287 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 SLC30A9Q6PML9 568 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ADGRG6Q86SQ4 1221 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 CCNJLQ8IV13 435 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 LSMEM2Q8N112 164 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 ARL14Q8N4G2 192 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 DDHD1Q8NEL9 900 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 CCDC110Q8TBZ0 833 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 PRR11Q96HE9 360 aaPredicted RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 ALS2CR12Q96Q35 445 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 GFM1Q96RP9 751 aaKnown RBP10.38□□□□□ -0.75
TPM4-209ENST00000588483 FAM118BQ9BPY3 351 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 TIMM29Q9BSF4 260 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 LRRN3Q9H3W5 708 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 POLR1BQ9H9Y6 1135 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 LRIT1Q9P2V4 623 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 PLEKHM1Q9Y4G2 1056 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 GPSM3Q9Y4H4 160 aa10.38□□□□□ -0.75
TPM4-209ENST00000588483 AGAP14A8MT82 685 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 F5H423 210 aaPredicted RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 CASC3O15234 703 aaKnown RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 ZW10O43264 779 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 LIASO43766 372 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 NRDCO43847 1150 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 USP12O75317 370 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 ASMTLO95671 621 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 AGTP01019 485 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 RPLP0P05388 317 aaKnown RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 ZNF8P17098 575 aaPredicted RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 GDF10P55107 478 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 MAZP56270 477 aaKnown RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 PDE1BQ01064 536 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 ITGA9Q13797 1035 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 TAF1AQ15573 450 aaPredicted RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 P3H1Q32P28 736 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 MARK2Q7KZI7 788 aaKnown RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 SLC13A5Q86YT5 568 aaPredicted RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 SLITRK4Q8IW52 837 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 SLC25A41Q8N5S1 370 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 TRIM58Q8NG06 486 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 WDR36Q8NI36 951 aaKnown RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 BRSK1Q8TDC3 778 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 BLOC1S5Q8TDH9 187 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 LRRC45Q96CN5 670 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 ATXN7L3BQ96GX2 97 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 ZNF578Q96N58 590 aaPredicted RBP10.37□□□□□ -0.75
TPM4-209ENST00000588483 TMEM74Q96NL1 305 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 TBL1YQ9BQ87 522 aa10.37□□□□□ -0.75
TPM4-209ENST00000588483 TMEM121Q9BTD3 319 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms