RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TSPAN7P41732 249 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 AP1B1Q10567 949 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 ZBTB17Q13105 803 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 KCNAB2Q13303 367 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 PDK2Q15119 407 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 INSCQ1MX18 579 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 ALG1LQ6GMV1 187 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 C16orf46Q6P387 395 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 CEACAM20Q6UY09 585 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 MAP7D3Q8IWC1 876 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 TRIM48Q8IWZ4 208 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 CTNNBL1Q8WYA6 563 aaPredicted RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 SH3KBP1Q96B97 665 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 WDR24Q96S15 920 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 HERPUD2Q9BSE4 406 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 PACSIN1Q9BY11 444 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 OR2AG1Q9H205 316 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 SARS2Q9NP81 518 aaKnown RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 PRDM8Q9NQV8 689 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 KLC4Q9NSK0 619 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 GEMIN8Q9NWZ8 242 aaKnown RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 CNOT6Q9ULM6 557 aaKnown RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 SHOC2Q9UQ13 582 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 DNAJC16Q9Y2G8 782 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 LUC7L2Q9Y383 392 aaKnown RBP13.56□□□□□ -0.24
HDAC5-208ENST00000588419 HEY1Q9Y5J3 304 aa13.56□□□□□ -0.24
HDAC5-208ENST00000588419 BOD1L1Q8NFC6 3051 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 LOC101059948A0A1B0GTJ6 334 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 LRRD1A4D1F6 860 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 CYSRT1A8MQ03 144 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 PDZK1P1A8MUH7 402 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 GOLGA6L19H0YKK7 550 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 NKX2-8O15522 239 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 SUV39H1O43463 412 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 STK17BO94768 372 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 KRT7P08729 469 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 F3P13726 295 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 ZNF8P17098 575 aaPredicted RBP13.55□□□□□ -0.24
HDAC5-208ENST00000588419 TYRP1P17643 537 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 CCR10P46092 362 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 GFERP55789 205 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 RPL26P61254 145 aaKnown RBP13.55□□□□□ -0.24
HDAC5-208ENST00000588419 TLE1Q04724 770 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 FOXM1Q08050 763 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 SLC10A2Q12908 348 aaPredicted RBP13.55□□□□□ -0.24
HDAC5-208ENST00000588419 MESDQ14696 234 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 SKIDA1Q1XH10 827 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 IYDQ6PHW0 289 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 B4GALNT4Q76KP1 1039 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 NLRP8Q86W28 1048 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 PQLC3Q8N755 202 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 BMPERQ8N8U9 685 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 SYN2Q92777 582 aaPredicted RBP13.55□□□□□ -0.24
HDAC5-208ENST00000588419 HDAC11Q96DB2 347 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 TEFMQ96QE5 360 aaKnown RBP13.55□□□□□ -0.24
HDAC5-208ENST00000588419 ADGRE3Q9BY15 652 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 DEF6Q9H4E7 631 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 RMI1Q9H9A7 625 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 DTLQ9NZJ0 730 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 ATXN10Q9UBB4 475 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 CPNE7Q9UBL6 633 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 CAPN11Q9UMQ6 739 aa13.55□□□□□ -0.24
HDAC5-208ENST00000588419 RPL26L1Q9UNX3 145 aaKnown RBP13.55□□□□□ -0.24
HDAC5-208ENST00000588419 ANKRD66B4E2M5 251 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 POLR1CO15160 346 aaPredicted RBP13.54□□□□□ -0.24
HDAC5-208ENST00000588419 NUAK1O60285 661 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 MTX2O75431 263 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 SLC25A14O95258 325 aaPredicted RBP13.54□□□□□ -0.24
HDAC5-208ENST00000588419 GYPCP04921 128 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 MMP2P08253 660 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 H2AFZP0C0S5 128 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 TNNT1P13805 278 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 CASP14P31944 242 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 PBX1P40424 430 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 SEPHS1P49903 392 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 EPHA4P54764 986 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 DYNLT1P63172 113 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 MC2RQ01718 297 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 CDC20Q12834 499 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 SQSTM1Q13501 440 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 COLEC12Q5KU26 742 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 ATP1A1-AS1Q5TC04 95 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 WDR74Q6RFH5 385 aaPredicted RBP13.54□□□□□ -0.24
HDAC5-208ENST00000588419 NPNTQ6UXI9 565 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 H2AFVQ71UI9 128 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 RAPGEF5Q92565 580 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 ELMO2Q96JJ3 720 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 AGAP3Q96P47 875 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 TGM7Q96PF1 710 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 TSGA13Q96PP4 275 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 LYSMD1Q96S90 227 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.54□□□□□ -0.24
HDAC5-208ENST00000588419 GPR63Q9BZJ6 419 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 CARD9Q9H257 536 aa13.54□□□□□ -0.24
HDAC5-208ENST00000588419 ADNPQ9H2P0 1102 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms