RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ZNF106Q9H2Y7 1883 aaKnown RBP19.7■□□□□ 0.74
TRIM47-204ENST00000587339 KIAA1549LQ6ZVL6 1849 aa19.69■□□□□ 0.74
TRIM47-204ENST00000587339 PTRHD1Q6GMV3 140 aaKnown RBP19.69■□□□□ 0.74
TRIM47-204ENST00000587339 UGT3A1Q6NUS8 523 aa19.69■□□□□ 0.74
TRIM47-204ENST00000587339 RFLNAQ6ZTI6 216 aa19.69■□□□□ 0.74
TRIM47-204ENST00000587339 NUDT18Q6ZVK8 323 aa19.69■□□□□ 0.74
TRIM47-204ENST00000587339 MTSS1LQ765P7 747 aa19.69■□□□□ 0.74
TRIM47-204ENST00000587339 SIDT2Q8NBJ9 832 aaKnown RBP19.69■□□□□ 0.74
TRIM47-204ENST00000587339 TXNDC5Q8NBS9 432 aaKnown RBP19.69■□□□□ 0.74
TRIM47-204ENST00000587339 SARDHQ9UL12 918 aa19.69■□□□□ 0.74
TRIM47-204ENST00000587339 UNC80Q8N2C7 3258 aa19.69■□□□□ 0.74
TRIM47-204ENST00000587339 NEMP2A6NFY4 417 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 RPS3P23396 243 aaKnown RBP eCLIP19.68■□□□□ 0.741e-9■■■□□ 16.3
TRIM47-204ENST00000587339 GRIA2P42262 883 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 ERAP2Q6P179 960 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 PARS2Q7L3T8 475 aaKnown RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 NKAPQ8N5F7 415 aaKnown RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 SMRP1Q8NCR6 262 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 TMIEQ8NEW7 156 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 CD200R1Q8TD46 325 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 SUSD6Q92537 303 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 PTERQ96BW5 349 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 NECTIN4Q96NY8 510 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 SLC30A3Q99726 388 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 SIKE1Q9BRV8 207 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 DERL2Q9GZP9 239 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 DRC3Q9H069 523 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 PRO3102Q9H379 93 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 GNPTGQ9UJJ9 305 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 RRP15Q9Y3B9 282 aaKnown RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 NUMBLQ9Y6R0 609 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 IQCF5A8MTL0 148 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 H3BMM5 538 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 ARNTLO00327 626 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 IPO13O94829 963 aaKnown RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 AQP5P55064 265 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 DNAJB13P59910 316 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 CCDC15Q0P6D6 951 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 GRIN2CQ14957 1233 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 ATP13A5Q4VNC0 1218 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 DPPA4Q7L190 304 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 CLDN19Q8N6F1 224 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 RHEBL1Q8TAI7 183 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 MOCOSQ96EN8 888 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 CCDC97Q96F63 343 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 TFB2MQ9H5Q4 396 aaKnown RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 SARS2Q9NP81 518 aaKnown RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 NCKIPSDQ9NZQ3 722 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 CD84Q9UIB8 345 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 PPM1HQ9ULR3 514 aa19.68■□□□□ 0.74
TRIM47-204ENST00000587339 MUC22E2RYF6 1773 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-204ENST00000587339 A8MT66 165 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 F8W8V4 182 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 APODP05090 189 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 IL12RB1P42701 662 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 KCNC1P48547 511 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 IL2P60568 153 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 ATP6V0D1P61421 351 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 RCN2Q14257 317 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 HSD11B1LQ7Z5J1 315 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 SLC22A9Q8IVM8 553 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 CCNYL1Q8N7R7 359 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 GIMAP7Q8NHV1 300 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 PIP4K2CQ8TBX8 421 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 CYP4F12Q9HCS2 524 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 ACSS2Q9NR19 701 aa19.67■□□□□ 0.74
TRIM47-204ENST00000587339 THAP10Q9P2Z0 257 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-204ENST00000587339 UBOX5O94941 541 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 KCNA5P22460 613 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 IGFBP4P22692 258 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ITGB7P26010 798 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 MMP12P39900 470 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 CLCN7P51798 805 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 RALGDSQ12967 914 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 LACTB2Q53H82 288 aaPredicted RBP19.66■□□□□ 0.74
TRIM47-204ENST00000587339 CFAP157Q5JU67 520 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 TRIM67Q6ZTA4 783 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 PIWIL4Q7Z3Z4 852 aaKnown RBP19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ZNF781Q8N8C0 355 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 KIAA1191Q96A73 305 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ERP27Q96DN0 273 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 COPS8Q99627 209 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 SPATA16Q9BXB7 569 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ILKAPQ9H0C8 392 aaPredicted RBP19.66■□□□□ 0.74
TRIM47-204ENST00000587339 WWP1Q9H0M0 922 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 TTYH1Q9H313 450 aaPredicted RBP19.66■□□□□ 0.74
TRIM47-204ENST00000587339 FAM83DQ9H4H8 585 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ZDHHC4Q9NPG8 344 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 PNPOQ9NVS9 261 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 HEY2Q9UBP5 337 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 EPHX1P07099 455 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 CHRNGP07510 517 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 NSG1P42857 185 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 METAP1P53582 386 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ADGRE1Q14246 886 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 SPRED3Q2MJR0 410 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 ARL13AQ5H913 290 aaPredicted RBP19.66■□□□□ 0.74
TRIM47-204ENST00000587339 FBXL19Q6PCT2 694 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 Q6ZVL8 140 aa19.66■□□□□ 0.74
TRIM47-204ENST00000587339 STAG3L4Q8TBR4 150 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms