RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 INSM1Q01101 510 aaPredicted RBP16.09■□□□□ 0.17
ERBB2-222ENST00000584908 PEX6Q13608 980 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 TCEA2Q15560 299 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 C4orf22Q6V702 233 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 GALNT13Q8IUC8 556 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 CCDC89Q8N998 374 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 FAM46DQ8NEK8 389 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 SPATS2LQ9NUQ6 558 aaKnown RBP16.09■□□□□ 0.17
ERBB2-222ENST00000584908 TAAR2Q9P1P5 351 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 ATXN10Q9UBB4 475 aa16.09■□□□□ 0.17
ERBB2-222ENST00000584908 PCYT1BQ9Y5K3 369 aaPredicted RBP16.09■□□□□ 0.17
ERBB2-222ENST00000584908 GLYATL1P3A0A0U1RQE8 302 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 AGAP14A8MT82 685 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 BUD23O43709 281 aaKnown RBP16.08■□□□□ 0.16
ERBB2-222ENST00000584908 VEGFDO43915 354 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 ASMTLO95671 621 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 ETS1P14921 441 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.16
ERBB2-222ENST00000584908 CCDC173Q0VFZ6 552 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 CAMK2BQ13554 666 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 ITGA9Q13797 1035 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 HLTFQ14527 1009 aaKnown RBP eCLIP16.08■□□□□ 0.16
ERBB2-222ENST00000584908 CYP1B1Q16678 543 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 CCDC157Q569K6 752 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 CDCP2Q5VXM1 449 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 EFL1Q7Z2Z2 1120 aaKnown RBP16.08■□□□□ 0.16
ERBB2-222ENST00000584908 ADGRG6Q86SQ4 1221 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 DDHD1Q8NEL9 900 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 OR4K2Q8NGD2 314 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 ACTRT1Q8TDG2 376 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 OSBPL9Q96SU4 736 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 NAP1L3Q99457 506 aaPredicted RBP16.08■□□□□ 0.16
ERBB2-222ENST00000584908 OR2AG1Q9H205 316 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 APPL1Q9UKG1 709 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 PYCARDQ9ULZ3 195 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 SNX12Q9UMY4 172 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 GPSM3Q9Y4H4 160 aa16.08■□□□□ 0.16
ERBB2-222ENST00000584908 DMXL2Q8TDJ6 3036 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 CPED1A4D0V7 1026 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 GRID2O43424 1007 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 PNLIPP16233 465 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 ZNF8P17098 575 aaPredicted RBP16.07■□□□□ 0.16
ERBB2-222ENST00000584908 RPL22P35268 128 aaKnown RBP16.07■□□□□ 0.16
ERBB2-222ENST00000584908 CLCNKAP51800 687 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 XIAPP98170 497 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 CDH17Q12864 832 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 PTPRCAPQ14761 206 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 CHRNA6Q15825 494 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 KHDC1Q4VXA5 237 aaKnown RBP16.07■□□□□ 0.16
ERBB2-222ENST00000584908 C14orf28Q4W4Y0 310 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 PERM1Q5SV97 790 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 CERCAMQ5T4B2 595 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 HES3Q5TGS1 186 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 FAM151BQ6UXP7 276 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 MARK2Q7KZI7 788 aaKnown RBP16.07■□□□□ 0.16
ERBB2-222ENST00000584908 DCBLD1Q8N8Z6 715 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 WDR48Q8TAF3 677 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 COG1Q8WTW3 980 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 DPEP2Q9H4A9 486 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 SUDS3Q9H7L9 328 aaPredicted RBP16.07■□□□□ 0.16
ERBB2-222ENST00000584908 EIF2B3Q9NR50 452 aaKnown RBP16.07■□□□□ 0.16
ERBB2-222ENST00000584908 RAB6BQ9NRW1 208 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 KCND1Q9NSA2 647 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 SIRPGQ9P1W8 387 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 GULP1Q9UBP9 304 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 ZNHIT2Q9UHR6 403 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 PLEKHM1Q9Y4G2 1056 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 KCTD3Q9Y597 815 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 WDFY3Q8IZQ1 3526 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 USP24Q9UPU5 2620 aa16.07■□□□□ 0.16
ERBB2-222ENST00000584908 UNC13CQ8NB66 2214 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 MROH6A6NGR9 719 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 PRR19A6NJB7 356 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 H7C0S8 307 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
ERBB2-222ENST00000584908 NUDT21O43809 227 aaKnown RBP16.06■□□□□ 0.16
ERBB2-222ENST00000584908 ZSCAN5DPP0CG00 497 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 GLB1P16278 677 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 HADHAP40939 763 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 ACTR1BP42025 376 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 KCNJ1P48048 391 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 ACTR1AP61163 376 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 LDLRAP1Q5SW96 308 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 SLC30A9Q6PML9 568 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 PRUNE1Q86TP1 453 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 NAGSQ8N159 534 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 OR13C4Q8NGS5 318 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 ZNF398Q8TD17 642 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 ZDHHC1Q8WTX9 485 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 MS4A14Q96JA4 679 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 ARFGAP3Q9NP61 516 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 FKBPLQ9UIM3 349 aa16.06■□□□□ 0.16
ERBB2-222ENST00000584908 ZZEF1O43149 2961 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 B4DGG1 531 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 NTN3O00634 580 aaPredicted RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 UGT1A9O60656 530 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 TCEA3O75764 348 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 SRP72O76094 671 aaKnown RBP16.05■□□□□ 0.16
ERBB2-222ENST00000584908 CDK14O94921 469 aa16.05■□□□□ 0.16
ERBB2-222ENST00000584908 PRAMEF1O95521 474 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms