RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 RAVER1Q8IY67 606 aaKnown RBP20.23■□□□□ 0.83
TOP3A-219ENST00000584887 CHP1Q99653 195 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 ANP32EQ9BTT0 268 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 OR2AG1Q9H205 316 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 OSGEPL1Q9H4B0 414 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 ZFYVE1Q9HBF4 777 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 ABHD10Q9NUJ1 306 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 HYOU1Q9Y4L1 999 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 RGSL1A5PLK6 1076 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 C3orf70A6NLC5 250 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-219ENST00000584887 J3QKU1 62 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 GRID2O43424 1007 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 WT1P19544 449 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-219ENST00000584887 ARHGAP25P42331 645 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 TMEM71Q6P5X7 295 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 CRTC3Q6UUV7 619 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 DTX1Q86Y01 620 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 PHYKPLQ8IUZ5 450 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 RHOT2Q8IXI1 618 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 HERPUD2Q9BSE4 406 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 GPR63Q9BZJ6 419 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 B3GNT4Q9C0J1 378 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 RMI1Q9H9A7 625 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 NHEJ1Q9H9Q4 299 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-219ENST00000584887 OCIAD1Q9NX40 245 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 ATXN10Q9UBB4 475 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 ZNF711Q9Y462 761 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 B3GALT1Q9Y5Z6 326 aa20.22■□□□□ 0.83
TOP3A-219ENST00000584887 ZNF487B1APH4 448 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 B8ZZF3 427 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 MFAP3LO75121 409 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 SLC25A14O95258 325 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-219ENST00000584887 SLC2A4P14672 509 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 ZFXP17010 805 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-219ENST00000584887 CYP4F2P78329 520 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 SQSTM1Q13501 440 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 PLA2G4EQ3MJ16 856 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-219ENST00000584887 IYDQ6PHW0 289 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 SLC9B2Q86UD5 537 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 VSTM4Q8IW00 320 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 IL22RA1Q8N6P7 574 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 EXD3Q8N9H8 876 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 GPR26Q8NDV2 337 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 NCSTNQ92542 709 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 IMP4Q96G21 291 aaKnown RBP20.21■□□□□ 0.83
TOP3A-219ENST00000584887 SARS2Q9NP81 518 aaKnown RBP20.21■□□□□ 0.83
TOP3A-219ENST00000584887 KLHL3Q9UH77 587 aa20.21■□□□□ 0.83
TOP3A-219ENST00000584887 PYCARD-AS1I3L0S3 204 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 SPOPO43791 374 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 SLC28A2O43868 658 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 NUAK1O60285 661 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 PMPCBO75439 489 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 ZNF8P17098 575 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-219ENST00000584887 CDK18Q07002 472 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 NFATC3Q12968 1075 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 LLGL1Q15334 1064 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 LINC00303Q3SY05 128 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 CCDC70Q6NSX1 233 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 PRICKLE2Q7Z3G6 844 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 VSIG1Q86XK7 387 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 RHOT1Q8IXI2 618 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 RNF214Q8ND24 703 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 SPATA22Q8NHS9 363 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 SH3KBP1Q96B97 665 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 EID2BQ96D98 161 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 OLFM3Q96PB7 478 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 TRIB3Q96RU7 358 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 SLC25A51Q9H1U9 297 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 CARD9Q9H257 536 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 PRDM8Q9NQV8 689 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 KLC4Q9NSK0 619 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 PCDHGA3Q9Y5H0 932 aa20.2■□□□□ 0.82
TOP3A-219ENST00000584887 FLNBO75369 2602 aaKnown RBP20.2■□□□□ 0.82
TOP3A-219ENST00000584887 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-219ENST00000584887 MTA2O94776 668 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 MT-CYBP00156 380 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-219ENST00000584887 ITGB2P05107 769 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 FAM87AP0C7U9 286 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 F3P13726 295 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 NOP2P46087 812 aaKnown RBP20.19■□□□□ 0.82
TOP3A-219ENST00000584887 ARSDP51689 593 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 INSCQ1MX18 579 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 DCAF12Q5T6F0 453 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 LRRC38Q5VT99 294 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 ANKS6Q68DC2 871 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 MFSD7Q6UXD7 560 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 NKD1Q969G9 470 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 ZSCAN5AQ9BUG6 496 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 DDA1Q9BW61 102 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 TSPY26PQ9H489 355 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 GLOD4Q9HC38 313 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 RAD18Q9NS91 495 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 DDX56Q9NY93 547 aaKnown RBP20.19■□□□□ 0.82
TOP3A-219ENST00000584887 UBP1Q9NZI7 540 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 CPNE7Q9UBL6 633 aa20.19■□□□□ 0.82
TOP3A-219ENST00000584887 HEMK1Q9Y5R4 338 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-219ENST00000584887 A0A0A6YYK5 440 aaPredicted RBP20.18■□□□□ 0.82
TOP3A-219ENST00000584887 KIR2DS5A0A0G2JLQ3 304 aa20.18■□□□□ 0.82
TOP3A-219ENST00000584887 A0A0G2JNG1 304 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms