RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	C17orf82	Q86X59	251 aa	Predicted RBP	13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	GPR26	Q8NDV2	337 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	CCDC112	Q8NEF3	446 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	IPMK	Q8NFU5	416 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	OR6C4	Q8NGE1	309 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	SRPK1	Q96SB4	655 aa	Known RBP	13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	GPR63	Q9BZJ6	419 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	TSGA10	Q9BZW7	698 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	DPEP2	Q9H4A9	486 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	POLR1B	Q9H9Y6	1135 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	TAAR2	Q9P1P5	351 aa		13.2	□□□□□ -0.3
SREBF1-223	ENST00000584760	KCNN4	O15554	427 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	DNAJC6	O75061	913 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ATP1A1	P05023	1023 aa	Known RBP	13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	GLB1	P16278	677 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	BPI	P17213	487 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	HLA-DPA1	P20036	260 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ERVPABLB-1	P60509	514 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	CTBS	Q01459	385 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	VAC14	Q08AM6	782 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ISX	Q2M1V0	245 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZNF569	Q5MCW4	686 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ANKRD20A2	Q5SQ80	823 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ANKRD20A1	Q5TYW2	823 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ANKRD20A3	Q5VUR7	823 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	PDPK2P	Q6A1A2	396 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ITPRIPL1	Q6GPH6	555 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	SLC30A9	Q6PML9	568 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	RBM44	Q6ZP01	1051 aa	Known RBP	13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	MARK2	Q7KZI7	788 aa	Known RBP	13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	TTC30B	Q8N4P2	665 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	TRAM1L1	Q8N609	369 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	WDR48	Q8TAF3	677 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	TTC9	Q92623	222 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	SPATA13	Q96N96	652 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	PLEKHG4B	Q96PX9	1271 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZSCAN5A	Q9BUG6	496 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	TRABD	Q9H4I3	376 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	RAD18	Q9NS91	495 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	APPL1	Q9UKG1	709 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	PLEKHM1	Q9Y4G2	1056 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	RNF215	Q9Y6U7	377 aa		13.19	□□□□□ -0.3
SREBF1-223	ENST00000584760	MAST4	O15021	2626 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760		A0A1W2PQM1	296 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	TCRBV7S2A1N4T	A0A589	114 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760		D6RAR5	112 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	KRT86	O43790	486 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	NUDT21	O43809	227 aa	Known RBP	13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	SLC28A2	O43868	658 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	DXO	O77932	396 aa	Known RBP	13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	ASMTL	O95671	621 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	FGF1	P05230	155 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	PNLIP	P16233	465 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	PSMB4	P28070	264 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	HMGCL	P35914	325 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	MAZ	P56270	477 aa	Known RBP	13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	CCZ1B	P86790	482 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	CCZ1	P86791	482 aa	Predicted RBP	13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	LRP8	Q14114	963 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	SPIDR	Q14159	915 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	DARS2	Q6PI48	645 aa	Known RBP	13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZNF438	Q7Z4V0	828 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	GALNT13	Q8IUC8	556 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	CCNJL	Q8IV13	435 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	KLHDC8B	Q8IXV7	354 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	SLC25A41	Q8N5S1	370 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	CCDC110	Q8TBZ0	833 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZDHHC1	Q8WTX9	485 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	FERMT1	Q9BQL6	677 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	SPATA16	Q9BXB7	569 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	FSD1L	Q9BXM9	530 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	DPH1	Q9BZG8	443 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	ASCL3	Q9NQ33	180 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	THSD1	Q9NS62	852 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	HACD3	Q9P035	362 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	ENTPD2	Q9Y5L3	495 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760	MGA	Q8IWI9	3026 aa		13.18	□□□□□ -0.3
SREBF1-223	ENST00000584760		A0A1W2PNU3	283 aa	Predicted RBP	13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	GOLGA6L9	A6NEM1	432 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZNF189	O75820	626 aa	Predicted RBP	13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ANXA9	O76027	345 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	STK10	O94804	968 aa	Known RBP	13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	RPLP0	P05388	317 aa	Known RBP	13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ADRA1A	P35348	466 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ACTR1B	P42025	376 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	TNNT3	P45378	269 aa	Predicted RBP	13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	GEM	P55040	296 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ACTR1A	P61163	376 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	CCL7	P80098	99 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	NR1D2	Q14995	579 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	KIAA1614	Q5VZ46	1190 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	RANBP10	Q6VN20	620 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	ZNF662	Q6ZS27	426 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	GLT6D1	Q7Z4J2	308 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	SPRED1	Q7Z699	444 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	LRRC8A	Q8IWT6	810 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	NAGS	Q8N159	534 aa		13.17	□□□□□ -0.3
SREBF1-223	ENST00000584760	TTC13	Q8NBP0	860 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms