RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 ANXA7P20073 488 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 C21orf33P30042 268 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 CDC25AP30304 524 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 PIGAP37287 484 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 MXI1P50539 228 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 HSD17B4P51659 736 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 FOXM1Q08050 763 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 GPS2Q13227 327 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 MAD2L1Q13257 205 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 KCNC3Q14003 757 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 BAATQ14032 418 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 HNF4GQ14541 408 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 PCLAFQ15004 111 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 DCST1Q5T197 706 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 LRIF1Q5T3J3 769 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 GARNL3Q5VVW2 1013 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 TYW3Q6IPR3 259 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 KRBA2Q6ZNG9 492 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 SYT2Q8N9I0 419 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 IL17RCQ8NAC3 791 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 AVL9Q8NBF6 648 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 HJURPQ8NCD3 748 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 APPL2Q8NEU8 664 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 OR8K5Q8NH50 307 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 OR14A16Q8NHC5 309 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 OIT3Q8WWZ8 545 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 SLC22A18Q96BI1 424 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 TXNDC15Q96J42 360 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 DACH2Q96NX9 599 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 KXD1Q9BQD3 176 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 HAUS8Q9BT25 410 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 TMEM39BQ9GZU3 492 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 EPB41L5Q9HCM4 733 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 ACSS1Q9NUB1 689 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 ARHGEF38Q9NXL2 777 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 CFDP1Q9UEE9 299 aaPredicted RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 STK39Q9UEW8 545 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 OR14J1Q9UGF5 321 aa3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 AGO1Q9UL18 857 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-209ENST00000583441 A8MV72 311 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 BECN2A8MW95 431 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 M0QZ24 198 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 PAPSS1O43252 624 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SPINT2O43291 252 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 DKC1O60832 514 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SOCS5O75159 536 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 AVILO75366 819 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SERPINI2O75830 405 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 TPOP07202 933 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 ADRB2P07550 413 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SELLP14151 372 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 PLA2G2AP14555 144 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 EIF2S3P41091 472 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 ARSEP51690 589 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 TRAF1Q13077 416 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 PRPF4BQ13523 1007 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 CTF1Q16619 201 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 TMEM266Q2M3C6 531 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 AMZ1Q400G9 498 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 TDRD12Q587J7 1177 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 HIST2H2BDQ6DRA6 164 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 FAM122CQ6P4D5 195 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SCYL3Q8IZE3 742 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SCML4Q8N228 414 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 MINDY1Q8N5J2 469 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 OR1J2Q8NGS2 313 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 FAM216AQ8WUB2 273 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 ADAMTS14Q8WXS8 1223 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 DNAAF4Q8WXU2 420 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 CEP295NLQ96MC4 621 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SRSF8Q9BRL6 282 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 APOL6Q9BWW8 343 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 MMP25Q9NPA2 562 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 MTMR10Q9NXD2 777 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 TAB2Q9NYJ8 693 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 WSB2Q9NYS7 404 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 FAM169AQ9Y6X4 670 aa3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-209ENST00000583441 A0A0U1RQJ8 604 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 LNP1A1A4G5 178 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 CPED1A4D0V7 1026 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 EIF4E1BA6NMX2 242 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 H3BQ06 376 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 HS3ST1O14792 307 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 ADAM20O43506 726 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 EGFP01133 1207 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 ICAM1P05362 532 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 HOXC6P09630 235 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 G6PDP11413 515 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 VPREB1P12018 145 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 TNFRSF8P28908 595 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 MSH2P43246 934 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 COMPP49747 757 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 LIG4P49917 911 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 CLCNKAP51800 687 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 HNRNPH2P55795 449 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 CXCL9Q07325 125 aa3.71□□□□□ -1.82
SMCHD1-209ENST00000583441 GRSF1Q12849 480 aaKnown RBP eCLIP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms