RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MON1BQ7L1V2 547 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 MAMDC2Q7Z304 686 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-215ENST00000583328 NLRP8Q86W28 1048 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 TP53INP2Q8IXH6 220 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 EXD1Q8NHP7 514 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 COX14Q96I36 57 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 C9orf72Q96LT7 481 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 MCCC1Q96RQ3 725 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-215ENST00000583328 AGAP2Q99490 1192 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 SLC25A23Q9BV35 468 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 TRIM55Q9BYV6 548 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 XPO4Q9C0E2 1151 aaKnown RBP12.17□□□□□ -0.46
TOP3A-215ENST00000583328 RCOR3Q9P2K3 495 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-215ENST00000583328 CPNE7Q9UBL6 633 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 PPIL1Q9Y3C6 166 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 PCDHGA6Q9Y5G7 932 aa12.17□□□□□ -0.46
TOP3A-215ENST00000583328 UTP20O75691 2785 aaKnown RBP12.17□□□□□ -0.46
TOP3A-215ENST00000583328 MN1Q10571 1320 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-215ENST00000583328 ESPL1Q14674 2120 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 A6NCN8 305 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 LILRA5A6NI73 299 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 EPHB6O15197 1021 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 DNAJC6O75061 913 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 SPAG6O75602 509 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 RASSF9O75901 435 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 C9P02748 559 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
TOP3A-215ENST00000583328 ACP5P13686 325 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 F3P13726 295 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 TYRP1P17643 537 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PSMA2P25787 234 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PBX1P40424 430 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 GARSP41250 739 aaKnown RBP12.16□□□□□ -0.46
TOP3A-215ENST00000583328 CCL11P51671 97 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 JAM2P57087 298 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 MAXP61244 160 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 OGDHQ02218 1023 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PTSQ03393 145 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PPP6R3Q5H9R7 873 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-215ENST00000583328 ZNF765Q7L2R6 523 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PGBD5Q8N414 524 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 AVL9Q8NBF6 648 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 NSMCE1Q8WV22 266 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PIH1D2Q8WWB5 315 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 TGM7Q96PF1 710 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 MGME1Q9BQP7 344 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 SNRNP25Q9BV90 132 aaKnown RBP12.16□□□□□ -0.46
TOP3A-215ENST00000583328 RIOK2Q9BVS4 552 aaKnown RBP12.16□□□□□ -0.46
TOP3A-215ENST00000583328 MAP10Q9P2G4 905 aa12.16□□□□□ -0.46
TOP3A-215ENST00000583328 PCYT1BQ9Y5K3 369 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-215ENST00000583328 MT-ND3P03897 115 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 ZNF30P17039 623 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 DCTP40126 519 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 EPHB1P54762 984 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 MRPL49Q13405 166 aaKnown RBP12.15□□□□□ -0.46
TOP3A-215ENST00000583328 INPP5JQ15735 1006 aaPredicted RBP12.15□□□□□ -0.46
TOP3A-215ENST00000583328 FIGNQ5HY92 759 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 RALGPS1Q5JS13 557 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 PPP1R15BQ5SWA1 713 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 PPP1R3BQ86XI6 285 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 CT55Q8WUE5 264 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 THAP4Q8WY91 577 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 IQCDQ96DY2 449 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 PLEKHG4BQ96PX9 1271 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 RMI1Q9H9A7 625 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 LHX9Q9NQ69 397 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 ACSS2Q9NR19 701 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 CWC15Q9P013 229 aaKnown RBP12.15□□□□□ -0.46
TOP3A-215ENST00000583328 VPS18Q9P253 973 aa12.15□□□□□ -0.46
TOP3A-215ENST00000583328 TCP11X1B4DZS4 312 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 C21orf140B9A014 251 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 TOX3O15405 576 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 GRID2O43424 1007 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 PRPSAP2O60256 369 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 RNF8O76064 485 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 SORBS2O94875 1100 aaKnown RBP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 UBXN7O94888 489 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 PEX11BO96011 259 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 VIPP01282 170 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 PDHA1P08559 390 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 FGF5P12034 268 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 MMP13P45452 471 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 LEPRP48357 1165 aaKnown RBP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 HCAR3P49019 387 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 ZNF135P52742 658 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 STC1P52823 247 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 ITKQ08881 620 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 CHAF1BQ13112 559 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 MARC1Q5VT66 337 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 CACHD1Q5VU97 1274 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 CPZQ66K79 652 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 ACAD10Q6JQN1 1059 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 TMEM26Q6ZUK4 368 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 PHYKPLQ8IUZ5 450 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 TRIM48Q8IWZ4 208 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 MCOLN2Q8IZK6 566 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 SEC14L1Q92503 715 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 SMIM14Q96QK8 99 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms