RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 TMEM206Q9H813 350 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 VPS37BQ9H9H4 285 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 KIF9Q9HAQ2 790 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 MAGEE1Q9HCI5 957 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 RANGRFQ9HD47 186 aaPredicted RBP3.16□□□□□ -1.9
KPNB1-208ENST00000580019 PAPOLBQ9NRJ5 636 aaKnown RBP3.16□□□□□ -1.9
KPNB1-208ENST00000580019 CHCHD3Q9NX63 227 aaKnown RBP3.16□□□□□ -1.9
KPNB1-208ENST00000580019 CYP39A1Q9NYL5 469 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 HAO2Q9NYQ3 351 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 CNOT8Q9UFF9 292 aaKnown RBP3.16□□□□□ -1.9
KPNB1-208ENST00000580019 IL17BQ9UHF5 180 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 EXOC7Q9UPT5 735 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 SSX2IPQ9Y2D8 614 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 WDR37Q9Y2I8 494 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.16□□□□□ -1.9
KPNB1-208ENST00000580019 CMAHPQ9Y471 501 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 NFS1Q9Y697 457 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 UTYO14607 1347 aa3.16□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM94Q12767 1356 aa3.15□□□□□ -1.9
KPNB1-208ENST00000580019 CLTCQ00610 1675 aaKnown RBP3.15□□□□□ -1.9
KPNB1-208ENST00000580019 SHPRHQ149N8 1683 aa3.15□□□□□ -1.9
KPNB1-208ENST00000580019 ITSN2Q9NZM3 1697 aa3.15□□□□□ -1.9
KPNB1-208ENST00000580019 A0A087WV48 116 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 A0A1B0GVM2 712 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 FAM90A8PA6NJQ4 464 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GPR89AB7ZAQ6 455 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 AP3B1O00203 1094 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CACNB4O00305 520 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 O00370 1275 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CASQ2O14958 399 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SLC25A17O43808 307 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 STRNO43815 780 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SLCO2B1O94956 709 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 PRSS23O95084 383 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 LETM1O95202 739 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 KAT7O95251 611 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 DDAH2O95865 285 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 TRUB2O95900 331 aaKnown RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 IFNB1P01574 187 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GBAP04062 536 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ALPPP05187 535 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 VIMP08670 466 aaKnown RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 HOXB5P09067 269 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 FAM90A13PP0C7W8 464 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 FAM90A24PP0C7X0 464 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GPR89BP0CG08 455 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CCDC192P0DO97 292 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ALPPL2P10696 532 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GHRP10912 638 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 PKMP14618 531 aaKnown RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 AGAP20933 346 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 MATN1P21941 496 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ACHEP22303 614 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GCSHP23434 173 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 PRPH2P23942 346 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GPTP24298 496 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CTNNB1P35222 781 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SKIV2L2P42285 1042 aaKnown RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ASMTP46597 345 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 IFNAR2P48551 515 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SULT1E1P49888 294 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ARFIP1P53367 373 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SH3BGRP55822 239 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ST8SIA6P61647 398 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 YWHAZP63104 245 aaKnown RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ACSM2AQ08AH3 577 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 DNASE1L3Q13609 305 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 HLXQ14774 488 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 VEPH1Q14D04 833 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 HFEQ30201 348 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GXYLT1Q4G148 440 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CBWD6Q4V339 395 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CBWD3Q5JTY5 395 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CCDC183Q5T5S1 534 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SERTAD4-AS1Q5TG53 156 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 ACSM2BQ68CK6 577 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 PMS2CLQ68D20 193 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 KRT39Q6A163 491 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 TXNDC8Q6A555 127 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 AADACL2Q6P093 401 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SLC39A5Q6ZMH5 540 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 C15orf39Q6ZRI6 1047 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 C11orf57Q6ZUT1 292 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 KCTD9Q7L273 389 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 LPCAT2Q7L5N7 544 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 TAOK1Q7L7X3 1001 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 PRSS45Q7RTY3 260 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 CACNA2D4Q7Z3S7 1137 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 XYLT1Q86Y38 959 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 MCEMP1Q8IX19 187 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 TIGD4Q8IY51 512 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 HACE1Q8IYU2 909 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 MIGA1Q8NAN2 632 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 SETD9Q8NE22 299 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 LPCAT1Q8NF37 534 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 OR52K2Q8NGK3 314 aa3.15□□□□□ -1.91
KPNB1-208ENST00000580019 MAFAQ8NHW3 353 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 GRAPLQ8TC17 118 aaPredicted RBP3.15□□□□□ -1.91
KPNB1-208ENST00000580019 KIAA1524Q8TCG1 905 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms