RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 INSCQ1MX18 579 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 C14orf28Q4W4Y0 310 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 PYCR3Q53H96 274 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 PERM1Q5SV97 790 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ZNF648Q5T619 568 aaPredicted RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 HENMT1Q5T8I9 393 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 PDPK2PQ6A1A2 396 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 OGFOD3Q6PK18 319 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 CRTC3Q6UUV7 619 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 RANBP10Q6VN20 620 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ZNF662Q6ZS27 426 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 USP53Q70EK8 1073 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 TAS2R42Q7RTR8 314 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 TRAPPC5Q8IUR0 188 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 OR4K2Q8NGD2 314 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 SLC35B2Q8TB61 432 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 MDM1Q8TC05 714 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ZNF398Q8TD17 642 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 BRSK1Q8TDC3 778 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 PTCD2Q8WV60 388 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 GATA6Q92908 595 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 EID2BQ96D98 161 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 NXPE2Q96DL1 559 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 DCUN1D1Q96GG9 259 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 AHCYL2Q96HN2 611 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 COX14Q96I36 57 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 PLEKHG4BQ96PX9 1271 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ZCCHC2Q9C0B9 1178 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 STRADBQ9C0K7 418 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 STN1Q9H668 368 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 LRRC40Q9H9A6 602 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A7Q9HAW7 530 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A10Q9HAW8 530 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 UGT1A8Q9HAW9 530 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 IL26Q9NPH9 171 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 KLC4Q9NSK0 619 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 TRMT1Q9NXH9 659 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 AKAP7Q9P0M2 348 aaPredicted RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ATXN10Q9UBB4 475 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 FEZ2Q9UHY8 353 aaPredicted RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 APPL1Q9UKG1 709 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 CNOT6Q9ULM6 557 aaKnown RBP6.49□□□□□ -1.37
TRAF4-213ENST00000578917 DNAJC16Q9Y2G8 782 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 JRKLQ9Y4A0 524 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 PLEKHM1Q9Y4G2 1056 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ARL5AQ9Y689 179 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 CHD6Q8TD26 2715 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 ZZEF1O43149 2961 aa6.49□□□□□ -1.37
TRAF4-213ENST00000578917 USP24Q9UPU5 2620 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 PLXNA2O75051 1894 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 NYNRINQ9P2P1 1898 aaKnown RBP6.48□□□□□ -1.37
TRAF4-213ENST00000578917 LY6G6EA0A0G2JKS1 128 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 PDZK1P1A8MUH7 402 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 GPR89AB7ZAQ6 455 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 TMX2-CTNND1H3BSU7 103 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 KMOO15229 486 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 NUDT21O43809 227 aaKnown RBP6.48□□□□□ -1.37
TRAF4-213ENST00000578917 NUAK1O60285 661 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 DNAJC6O75061 913 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 MTX2O75431 263 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 TCEA3O75764 348 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 METTL18O95568 372 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 MPOP05164 745 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 APRTP07741 180 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 GPR89BP0CG08 455 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 RALBP11234 206 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 ZNF7P17097 686 aaPredicted RBP6.48□□□□□ -1.37
TRAF4-213ENST00000578917 ZNF8P17098 575 aaPredicted RBP6.48□□□□□ -1.37
TRAF4-213ENST00000578917 IDSP22304 550 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 FDFT1P37268 417 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 HADHAP40939 763 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 GDF10P55107 478 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 MAZP56270 477 aaKnown RBP6.48□□□□□ -1.37
TRAF4-213ENST00000578917 OR1D5P58170 312 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 TMEM115Q12893 351 aaPredicted RBP6.48□□□□□ -1.37
TRAF4-213ENST00000578917 KLF1Q13351 362 aaPredicted RBP6.48□□□□□ -1.37
TRAF4-213ENST00000578917 NFATC2Q13469 925 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 OLIG2Q13516 323 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 LAMB3Q13751 1172 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 PTPRCAPQ14761 206 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 CHRNA6Q15825 494 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 CCNG2Q16589 344 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 SKIDA1Q1XH10 827 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 ISXQ2M1V0 245 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 PLA2G4EQ3MJ16 856 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 MAP9Q49MG5 647 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 ATP13A5Q4VNC0 1218 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 LDLRAP1Q5SW96 308 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 CERCAMQ5T4B2 595 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 PHF19Q5T6S3 580 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 C4orf22Q6V702 233 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 ADGRG6Q86SQ4 1221 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 PIM3Q86V86 326 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 LRRTM4Q86VH4 590 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 NRROSQ86YC3 692 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 CCNJLQ8IV13 435 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 TRIM48Q8IWZ4 208 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 LSMEM2Q8N112 164 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 ARL14Q8N4G2 192 aa6.48□□□□□ -1.37
TRAF4-213ENST00000578917 TTC30BQ8N4P2 665 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms