RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 SPATA16Q9BXB7 569 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 NMRAL1Q9HBL8 299 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.42■□□□□ 0.54
PRKCA-203ENST00000578063 CD84Q9UIB8 345 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 BPTFQ12830 3046 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 EYSQ5T1H1 3165 aa18.42■□□□□ 0.54
PRKCA-203ENST00000578063 H3BMM5 538 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 MAN2B1O00754 1011 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 MID1O15344 667 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 AP1G1O43747 822 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 ADAM23O75077 832 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 DRD3P35462 400 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 GMPRP36959 345 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 COPAP53621 1224 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 SEC24CP53992 1094 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 PDAP1Q13442 181 aaKnown RBP18.41■□□□□ 0.54
PRKCA-203ENST00000578063 FAM83EQ2M2I3 478 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 HENMT1Q5T8I9 393 aaKnown RBP18.41■□□□□ 0.54
PRKCA-203ENST00000578063 IER5LQ5T953 404 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 AGAP9Q5VTM2 703 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 TRIM42Q8IWZ5 723 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 DTD2Q96FN9 168 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 COQ10AQ96MF6 247 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF358Q9NW07 568 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 ZDHHC3Q9NYG2 299 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 GNPTGQ9UJJ9 305 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 DUSP12Q9UNI6 340 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 FADS3Q9Y5Q0 445 aa18.41■□□□□ 0.54
PRKCA-203ENST00000578063 TCP11X1B4DZS4 312 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 PLK4O00444 970 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 LTA4HP09960 611 aaKnown RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 TAC1P20366 129 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 NSG1P42857 185 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 PGGT1BP53609 377 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 RPS14P62263 151 aaKnown RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 TIAL1Q01085 375 aaKnown RBP eCLIP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 TFF2Q03403 129 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 KIAA1211LQ6NV74 962 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 KLC3Q6P597 504 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF765Q7L2R6 523 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 PIM3Q86V86 326 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 AADATQ8N5Z0 425 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 CXorf40AQ8TE69 158 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 ERLEC1Q96DZ1 483 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 UBXN10Q96LJ8 280 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 COPS8Q99627 209 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 SYTL2Q9HCH5 934 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 RUVBL2Q9Y230 463 aaKnown RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 MED16Q9Y2X0 877 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 OAS3Q9Y6K5 1087 aaKnown RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 A0A1W2PQF6 199 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 WDR91A4D1P6 747 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 E5RI56 91 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 BPGMP07738 259 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 VIMP08670 466 aaKnown RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 NEFHP12036 1026 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 ZNF37AP17032 561 aaPredicted RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 CA5AP35218 305 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 SKIV2L2P42285 1042 aaKnown RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 IRX4P78413 519 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 CREB5Q02930 508 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 CCINQ13939 588 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 EOGTQ5NDL2 527 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 AGBL4Q5VU57 503 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 UGT3A1Q6NUS8 523 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 RAB3IL1Q8TBN0 382 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 RDH11Q8TC12 318 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 SCAMP4Q969E2 229 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 NXNL1Q96CM4 212 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 NSRP1Q9H0G5 558 aaKnown RBP18.4■□□□□ 0.54
PRKCA-203ENST00000578063 IGSF5Q9NSI5 407 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 SIRPGQ9P1W8 387 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 COPG2Q9UBF2 871 aa18.4■□□□□ 0.54
PRKCA-203ENST00000578063 F5P12259 2224 aa18.39■□□□□ 0.54
PRKCA-203ENST00000578063 IGLV3-16A0A075B6K0 115 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 SHISA7A6NL88 538 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 TSPAN6O43657 245 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 FAM107AO95990 144 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 CCDC166P0CW27 439 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 C6P13671 934 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 GM2AP17900 193 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 DLG1Q12959 904 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 CSHL1Q14406 222 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 MLF2Q15773 248 aaPredicted RBP18.39■□□□□ 0.53
PRKCA-203ENST00000578063 PTRHD1Q6GMV3 140 aaKnown RBP18.39■□□□□ 0.53
PRKCA-203ENST00000578063 LRRC8EQ6NSJ5 796 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 MACC1Q6ZN28 852 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 CACUL1Q86Y37 369 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 NUDCD3Q8IVD9 361 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 HDDC3Q8N4P3 179 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 BCAS4Q8TDM0 211 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 HEXDCQ8WVB3 486 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 ZNF75CPQ92670 426 aaPredicted RBP18.39■□□□□ 0.53
PRKCA-203ENST00000578063 AP2M1Q96CW1 435 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 SCYL1Q96KG9 808 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 GPR78Q96P69 363 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 GPR21Q99679 349 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 RIOK2Q9BVS4 552 aaKnown RBP18.39■□□□□ 0.53
PRKCA-203ENST00000578063 BOCQ9BWV1 1114 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 ABCG8Q9H221 673 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms