RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 KYQ8NBH2 561 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 OR4K2Q8NGD2 314 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 IFI44Q8TCB0 444 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 NAP1L3Q99457 506 aaPredicted RBP19.13■□□□□ 0.65
SS18-208ENST00000577751 SUDS3Q9H7L9 328 aaPredicted RBP19.13■□□□□ 0.65
SS18-208ENST00000577751 RAB6BQ9NRW1 208 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 SPATS2LQ9NUQ6 558 aaKnown RBP19.13■□□□□ 0.65
SS18-208ENST00000577751 PADI4Q9UM07 663 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 PLEKHM1Q9Y4G2 1056 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 GPSM3Q9Y4H4 160 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 ASXL3Q9C0F0 2248 aa19.13■□□□□ 0.65
SS18-208ENST00000577751 CPED1A4D0V7 1026 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 PGRMC1O00264 195 aaKnown RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 VEGFDO43915 354 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 NOBOXO60393 691 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 ZNF8P17098 575 aaPredicted RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 TPH1P17752 444 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 CA5AP35218 305 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 ZNF140P52738 457 aaPredicted RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 XIAPP98170 497 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 INSM1Q01101 510 aaPredicted RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 LRP8Q14114 963 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 ZNF648Q5T619 568 aaPredicted RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 FAM151BQ6UXP7 276 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 CCNI2Q6ZMN8 369 aaPredicted RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 EFL1Q7Z2Z2 1120 aaKnown RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 CACTIN-AS1Q8N1I8 211 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 TMEM121BQ9BXQ6 578 aaPredicted RBP19.12■□□□□ 0.65
SS18-208ENST00000577751 DPEP2Q9H4A9 486 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 ARFGAP3Q9NP61 516 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 KCND1Q9NSA2 647 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 SMOXQ9NWM0 555 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 TAAR2Q9P1P5 351 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 SIRPGQ9P1W8 387 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 GULP1Q9UBP9 304 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 ZNHIT2Q9UHR6 403 aa19.12■□□□□ 0.65
SS18-208ENST00000577751 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.12■□□□□ 0.659e-6■■■■□ 20.1
SS18-208ENST00000577751 AGAP14A8MT82 685 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 ZNF185O15231 689 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A9O60656 530 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A6P19224 532 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A1P22309 533 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A4P22310 534 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 PSMA3P25788 255 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A3P35503 534 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A5P35504 534 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 CDH17Q12864 832 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 ITGA9Q13797 1035 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 KHDC1Q4VXA5 237 aaKnown RBP19.11■□□□□ 0.65
SS18-208ENST00000577751 TTC27Q6P3X3 843 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 GSTA5Q7RTV2 222 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 SFTPA2Q8IWL1 248 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 OR52K1Q8NGK4 314 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 OR13C4Q8NGS5 318 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 ZNF398Q8TD17 642 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 NAT6Q93015 286 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 AP1M1Q9BXS5 423 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 OR2AG1Q9H205 316 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A7Q9HAW7 530 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A10Q9HAW8 530 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 UGT1A8Q9HAW9 530 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 SMARCAL1Q9NZC9 954 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 FKBPLQ9UIM3 349 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 APPL1Q9UKG1 709 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 PRKAB1Q9Y478 270 aa19.11■□□□□ 0.65
SS18-208ENST00000577751 RP1P56715 2156 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 COL27A1Q8IZC6 1860 aaPredicted RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 E7EVH7 732 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 GPR39O43194 453 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 GRID2O43424 1007 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 OPA1O60313 960 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 MTX2O75431 263 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 SRP72O76094 671 aaKnown RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 PRAMEF1O95521 474 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 TCP1P17987 556 aaKnown RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 HADHAP40939 763 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 ACTR1BP42025 376 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 GRIA1P42261 906 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 ACTR1AP61163 376 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 GNG11P61952 73 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 TMEM115Q12893 351 aaPredicted RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 PEX6Q13608 980 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 HLTFQ14527 1009 aaKnown RBP eCLIP19.1■□□□□ 0.65
SS18-208ENST00000577751 C14orf28Q4W4Y0 310 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 PERM1Q5SV97 790 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 HES3Q5TGS1 186 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 PAPD7Q5XG87 772 aaKnown RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 SLC30A9Q6PML9 568 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 CHST15Q7LFX5 561 aaPredicted RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 OR6C4Q8NGE1 309 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 MAGOHBQ96A72 148 aaKnown RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 CASS4Q9NQ75 786 aa19.1■□□□□ 0.65
SS18-208ENST00000577751 EIF2B3Q9NR50 452 aaKnown RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 PIH1D1Q9NWS0 290 aaKnown RBP19.1■□□□□ 0.65
SS18-208ENST00000577751 MROH6A6NGR9 719 aa19.09■□□□□ 0.65
SS18-208ENST00000577751 B4DGG1 531 aa19.09■□□□□ 0.65
SS18-208ENST00000577751 H7C0S8 307 aa19.09■□□□□ 0.65
SS18-208ENST00000577751 CDK14O94921 469 aa19.09■□□□□ 0.65
SS18-208ENST00000577751 APRTP07741 180 aa19.09■□□□□ 0.65
SS18-208ENST00000577751 GLB1P16278 677 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms