RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 C1SP09871 688 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 HNRNPLP14866 589 aaKnown RBP eCLIP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 XPAP23025 273 aaPredicted RBP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 GABRB3P28472 473 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 VIPR1P32241 457 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 MC4RP32245 332 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 CA5AP35218 305 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 GMPRP36959 345 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 GP5P40197 560 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 CDKN1CP49918 316 aaPredicted RBP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 CSRP3P50461 194 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 ATP1A2P50993 1020 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 PGGT1BP53609 377 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 ACVR1Q04771 509 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 GRSF1Q12849 480 aaKnown RBP eCLIP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 NAB1Q13506 487 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 LAMB3Q13751 1172 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 GRM3Q14832 879 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 TNFAIP8L3Q5GJ75 292 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 MROH9Q5TGP6 573 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 LRRC66Q68CR7 880 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 BRAT1Q6PJG6 821 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 USP45Q70EL2 814 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 CYS1Q717R9 158 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 CROCCP2Q86T23 111 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 TRABD2AQ86V40 505 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 EXOC3L1Q86VI1 746 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 TXNDC5Q8NBS9 432 aaKnown RBP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 ACVR1CQ8NER5 493 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 CDKN2AIPNLQ96HQ2 116 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 SERAC1Q96JX3 654 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 HHIPQ96QV1 700 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 FAM167BQ9BTA0 163 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 OSBPL1AQ9BXW6 950 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 SLC6A17Q9H1V8 727 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 TRABDQ9H4I3 376 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 ZFYVE1Q9HBF4 777 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 MAGEE1Q9HCI5 957 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 KCNK4Q9NYG8 393 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 HACD3Q9P035 362 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 IL17CQ9P0M4 197 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 FETUBQ9UGM5 382 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 EBF1Q9UH73 591 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 MBD1Q9UIS9 605 aaPredicted RBP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 PPM1HQ9ULR3 514 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 APOBEC2Q9Y235 224 aaKnown RBP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 MTO1Q9Y2Z2 717 aaKnown RBP10.02□□□□□ -0.81
CRLF3-202ENST00000577725 STARD13Q9Y3M8 1113 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 MYO9AB2RTY4 2548 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 LRRK1Q38SD2 2015 aa10.02□□□□□ -0.81
CRLF3-202ENST00000577725 IQANK1A0A1B0GTG1 560 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ENO4A6NNW6 628 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 MID1O15344 667 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 SLC7A4O43246 635 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 SPINT1O43278 529 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ADAM23O75077 832 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 MT-ND3P03897 115 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 SNRPAP09012 282 aaKnown RBP10.01□□□□□ -0.81
CRLF3-202ENST00000577725 NR1D1P20393 614 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ITPKBP27987 946 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 DHPSP49366 369 aaPredicted RBP10.01□□□□□ -0.81
CRLF3-202ENST00000577725 CBX1P83916 185 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 RALGDSQ12967 914 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 PEX6Q13608 980 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ELAVL3Q14576 367 aaKnown RBP10.01□□□□□ -0.81
CRLF3-202ENST00000577725 UGP2Q16851 508 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ZRANB3Q5FWF4 1079 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 COLEC12Q5KU26 742 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 GRTP1Q5TC63 336 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ZNF449Q6P9G9 518 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 CNSTQ6PJW8 725 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 AFTPHQ6ULP2 937 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 PCSK4Q6UW60 755 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 FAM151BQ6UXP7 276 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 TTC7BQ86TV6 843 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 SLC41A1Q8IVJ1 513 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 IL17RCQ8NAC3 791 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 C2CD4AQ8NCU7 369 aaPredicted RBP10.01□□□□□ -0.81
CRLF3-202ENST00000577725 TMIEQ8NEW7 156 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 FAM76AQ8TAV0 307 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 SCRN2Q96FV2 425 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 POM121Q96HA1 1249 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 MCCC1Q96RQ3 725 aaPredicted RBP10.01□□□□□ -0.81
CRLF3-202ENST00000577725 RBBP8Q99708 897 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 CPNE1Q99829 537 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 WRAP53Q9BUR4 548 aaKnown RBP10.01□□□□□ -0.81
CRLF3-202ENST00000577725 CAB39LQ9H9S4 337 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 PPCSQ9HAB8 311 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 POLMQ9NP87 494 aaPredicted RBP10.01□□□□□ -0.81
CRLF3-202ENST00000577725 KCNK9Q9NPC2 374 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 CATSPERZQ9NTU4 200 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 TXNDC16Q9P2K2 825 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 CD84Q9UIB8 345 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ZNF180Q9UJW8 692 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 FBXO5Q9UKT4 447 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 RIMKLBQ9ULI2 386 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 PPIL1Q9Y3C6 166 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ACACAQ13085 2346 aa10.01□□□□□ -0.81
CRLF3-202ENST00000577725 ZNF106Q9H2Y7 1883 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms