RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 LEMD2Q8NC56 503 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 FIBINQ8TAL6 211 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 HEPHQ9BQS7 1158 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 NEURL2Q9BR09 285 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 C2orf49Q9BVC5 232 aaPredicted RBP13.74□□□□□ -0.21
RNF43-202ENST00000577625 CCDC106Q9BWC9 280 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 C1QTNF1Q9BXJ1 281 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 THAP1Q9NVV9 213 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 TLK1Q9UKI8 766 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 PCDHGC4Q9Y5F7 938 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 HCFC2Q9Y5Z7 792 aa13.74□□□□□ -0.21
RNF43-202ENST00000577625 CCL22O00626 93 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 AURKAO14965 403 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 SLC35E2BP0CK96 405 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 CD70P32970 193 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 RAB10P61026 200 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 TRAF2Q12933 501 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 GPM6BQ13491 265 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 SLC12A1Q13621 1099 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 NCEH1Q6PIU2 408 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 ELMSAN1Q6PJG2 1045 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 GRASPQ7Z6J2 395 aaPredicted RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 CILP2Q8IUL8 1156 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 SLC41A1Q8IVJ1 513 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 MFSD6LQ8IWD5 586 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 STYXQ8WUJ0 223 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 HDAC10Q969S8 669 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 ZNF707Q96C28 371 aaPredicted RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 SAMD11Q96NU1 681 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 NMRAL1Q9HBL8 299 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 TDP1Q9NUW8 608 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 INTS6Q9UL03 887 aaKnown RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 YBX2Q9Y2T7 364 aaKnown RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 SPO11Q9Y5K1 396 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 RAI2Q9Y5P3 530 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 SOBPA7XYQ1 873 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 K7ERQ8 282 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 PHGDHO43175 533 aaKnown RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 CRTAMO95727 393 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 APOA4P06727 396 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 STMN1P16949 149 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 ERVK-21P61565 698 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 RHOAP61586 193 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 POU4F1Q01851 419 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 PTPRCAPQ14761 206 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 SHHQ15465 462 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 PLEKHG6Q3KR16 790 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 ATXN7L2Q5T6C5 722 aaPredicted RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 DCDC5Q6ZRR9 648 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 ZCCHC23Q6ZST2 131 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 ADGRD2Q7Z7M1 963 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 C10orf107Q8IVU9 208 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 OR6P1Q8NGX9 317 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 PPP1R14CQ8TAE6 165 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 BORCS5Q969J3 196 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 ACDQ96AP0 544 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 LMLNQ96KR4 655 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 C6orf203Q9P0P8 240 aaPredicted RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.73□□□□□ -0.21
RNF43-202ENST00000577625 MID2Q9UJV3 735 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 APPL1Q9UKG1 709 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 DOLKQ9UPQ8 538 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 SCN8AQ9UQD0 1980 aa13.73□□□□□ -0.21
RNF43-202ENST00000577625 SMAD6O43541 496 aaKnown RBP13.72□□□□□ -0.21
RNF43-202ENST00000577625 NDUFB5O43674 189 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CYBBP04839 570 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 SERPINE1P05121 402 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 POU2F2P09086 479 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ZNF23P17027 643 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 SAT1P21673 171 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 GRK2P25098 689 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CLCN5P51795 746 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ZNF77Q15935 545 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 KCTD21Q4G0X4 260 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CNSTQ6PJW8 725 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 LPCAT2Q7L5N7 544 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 PTAR1Q7Z6K3 402 aaPredicted RBP13.72□□□□□ -0.21
RNF43-202ENST00000577625 CRLF3Q8IUI8 442 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 CEP97Q8IW35 865 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 LPCAT1Q8NF37 534 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 OR13C4Q8NGS5 318 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 PPP4R1Q8TF05 950 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 SGF29Q96ES7 293 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ELMO2Q96JJ3 720 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 TBATAQ96M53 351 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ZSWIM3Q96MP5 696 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 TSNARE1Q96NA8 513 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 SMIM14Q96QK8 99 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 C20orf27Q9GZN8 174 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 DRC3Q9H069 523 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 SORCS3Q9UPU3 1222 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 ACOT9Q9Y305 439 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 AP4B1Q9Y6B7 739 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 OR51F1A6NGY5 319 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 H3BNX3 289 aa13.72□□□□□ -0.21
RNF43-202ENST00000577625 RPP40O75818 363 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms