RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 HAO1Q9UJM8 370 aa2.34□□□□□ -2.03
TOP2A-202ENST00000577541 TMEM184BQ9Y519 407 aaPredicted RBP2.34□□□□□ -2.03
TOP2A-202ENST00000577541 PRRC2AP48634 2157 aaKnown RBP2.34□□□□□ -2.04
TOP2A-202ENST00000577541 ZNF318Q5VUA4 2279 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 IGLV5-45A0A087WSX0 123 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 A0A1W2PQF6 199 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 RRN3P2A6NIE6 340 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 PMS2P5A8MQ11 134 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 TPD52L2O43399 206 aaKnown RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 DAB1O75553 588 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 PDE9AO76083 593 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 SEC31AO94979 1220 aaKnown RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 CNTFP26441 200 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 ABCD3P28288 659 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 AHRP35869 848 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 GNL1P36915 607 aaPredicted RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 PIP4K2AP48426 406 aaPredicted RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 CLDN20P56880 219 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 LINC01547P58512 204 aaPredicted RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 SLC9C2Q5TAH2 1124 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 C18orf63Q68DL7 685 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 SIGIRRQ6IA17 410 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 SLC35E4Q6ICL7 350 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 KCTD8Q6ZWB6 473 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 Q75L30 129 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 SLC26A9Q7LBE3 791 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 APLFQ8IW19 511 aaPredicted RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 SRBD1Q8N5C6 995 aaKnown RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 TMEM190Q8WZ59 177 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 EVI5LQ96CN4 794 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 HVCN1Q96D96 273 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 ZNF583Q96ND8 569 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 ZNF599Q96NL3 588 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 ATOH8Q96SQ7 321 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 PCYT2Q99447 389 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 ASCL2Q99929 193 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 SEBOXQ9HB31 216 aaPredicted RBP2.33□□□□□ -2.04
TOP2A-202ENST00000577541 VEZTQ9HBM0 779 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 CAPN7Q9Y6W3 813 aa2.33□□□□□ -2.04
TOP2A-202ENST00000577541 FAM237AA0A1B0GTK4 181 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 A0A1B0GVC2 190 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 C5orf60A6NFR6 353 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 VCYO14598 125 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 PCDH7O60245 1069 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 SEC14L2O76054 403 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 EGFP01133 1207 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 PATE4P0C8F1 98 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ZNF182P17025 639 aaPredicted RBP2.32□□□□□ -2.04
TOP2A-202ENST00000577541 POLR2CP19387 275 aaPredicted RBP2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ALDH4A1P30038 563 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ISL1P61371 349 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ZBED6P86452 979 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 BIRC3Q13489 604 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 KRTCAP3Q53RY4 240 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 SIRPB2Q5JXA9 342 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 GPATCH4Q5T3I0 446 aaKnown RBP2.32□□□□□ -2.04
TOP2A-202ENST00000577541 TTI2Q6NXR4 508 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 CDC73Q6P1J9 531 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 PLEKHM3Q6ZWE6 761 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 HAPLN4Q86UW8 402 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ARMC8Q8IUR7 673 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 SLC38A9Q8NBW4 561 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ACVR1CQ8NER5 493 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 IL17REQ8NFR9 667 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 OR10V1Q8NGI7 309 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 DNAAF4Q8WXU2 420 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 APBB2Q92870 758 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 FAM149B1Q96BN6 582 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ORAI1Q96D31 301 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ST6GAL2Q96JF0 529 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 TMEM68Q96MH6 324 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 MPHOSPH8Q99549 860 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 PCGF1Q9BSM1 259 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 SIL1Q9H173 461 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 SCPEP1Q9HB40 452 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 TAS2R10Q9NYW0 307 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ZNF624Q9P2J8 865 aaPredicted RBP2.32□□□□□ -2.04
TOP2A-202ENST00000577541 ACAD8Q9UKU7 415 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 NAALADL1Q9UQQ1 740 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 PRSS21Q9Y6M0 314 aa2.32□□□□□ -2.04
TOP2A-202ENST00000577541 A0A1W2PPI3 338 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 NPIPB15A6NHN6 443 aaPredicted RBP2.31□□□□□ -2.04
TOP2A-202ENST00000577541 BLOC1S5-TXNDC5H3BN57 136 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 M0QZ24 198 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 ANKRD28O15084 1053 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 EIF3DO15371 548 aaKnown RBP eCLIP2.31□□□□□ -2.04
TOP2A-202ENST00000577541 TGFB1I1O43294 461 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 BUD23O43709 281 aaKnown RBP2.31□□□□□ -2.04
TOP2A-202ENST00000577541 CTSVO60911 334 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 EIF3JO75822 258 aaKnown RBP2.31□□□□□ -2.04
TOP2A-202ENST00000577541 PRSS1P07477 247 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 ERVK-10P10266 1014 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 CSF2RAP15509 400 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 HOXC8P31273 242 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 ELF1P32519 619 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 PAFAH1B1P43034 410 aa2.31□□□□□ -2.04
TOP2A-202ENST00000577541 ARCN1P48444 511 aaKnown RBP2.31□□□□□ -2.04
TOP2A-202ENST00000577541 RPL7AP62424 266 aaKnown RBP2.31□□□□□ -2.04
TOP2A-202ENST00000577541 MAD2L1Q13257 205 aaPredicted RBP2.31□□□□□ -2.04
TOP2A-202ENST00000577541 KIR2DS3Q14952 304 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms